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authorArtyom Bologov2024-05-02 03:02:59 +0400
committerArtyom Bologov2024-05-02 03:02:59 +0400
commit2495717fbda8020177879f6e61411c59154c7300 (patch)
treee21a3ab3570877c2804e559071a66ed9e3051518 /issues
parentd278f20e3510a934fc838036eff3c039dbae388b (diff)
downloadgn-gemtext-2495717fbda8020177879f6e61411c59154c7300.tar.gz
mgamma/..convert: Float storage is done too.
Diffstat (limited to 'issues')
-rw-r--r--issues/mgamma/mgamma-convert.gmi4
1 files changed, 2 insertions, 2 deletions
diff --git a/issues/mgamma/mgamma-convert.gmi b/issues/mgamma/mgamma-convert.gmi
index d1b432a..d822800 100644
--- a/issues/mgamma/mgamma-convert.gmi
+++ b/issues/mgamma/mgamma-convert.gmi
@@ -10,7 +10,7 @@ MGamma can convert between different formats.
# Tasks
-* [ ] Store genotypes as floats instead of doubles in lmdb
+* [X] Store genotypes as floats instead of doubles in lmdb
* [X] Required for the above: rework the type system in guile-gsl to allow float vectors/matrices
* [ ] Add annotations to genotype lmdb format - probably as the first named columns
* [X] Provide a metadata header in JSON that tracks such info and a version
@@ -22,7 +22,7 @@ MGamma can convert between different formats.
=> https://kbroman.org/qtl2/assets/vignettes/input_files.html
-* [ ] Write kinship lmdb as floats (half size)
+* [X] Write kinship lmdb as floats (half size)
* [X] Add individual names as first column in kinship rows (implemented as plain unsigned ints for now)
* [ ] Somehow find the names for individuals? Is there a file format for that?
* [X] If symmetric only store half the data