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| author | Artyom Bologov | 2024-05-02 03:02:59 +0400 |
|---|---|---|
| committer | Artyom Bologov | 2024-05-02 03:02:59 +0400 |
| commit | 2495717fbda8020177879f6e61411c59154c7300 (patch) | |
| tree | e21a3ab3570877c2804e559071a66ed9e3051518 /issues | |
| parent | d278f20e3510a934fc838036eff3c039dbae388b (diff) | |
| download | gn-gemtext-2495717fbda8020177879f6e61411c59154c7300.tar.gz | |
mgamma/..convert: Float storage is done too.
Diffstat (limited to 'issues')
| -rw-r--r-- | issues/mgamma/mgamma-convert.gmi | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/issues/mgamma/mgamma-convert.gmi b/issues/mgamma/mgamma-convert.gmi index d1b432a..d822800 100644 --- a/issues/mgamma/mgamma-convert.gmi +++ b/issues/mgamma/mgamma-convert.gmi @@ -10,7 +10,7 @@ MGamma can convert between different formats. # Tasks -* [ ] Store genotypes as floats instead of doubles in lmdb +* [X] Store genotypes as floats instead of doubles in lmdb * [X] Required for the above: rework the type system in guile-gsl to allow float vectors/matrices * [ ] Add annotations to genotype lmdb format - probably as the first named columns * [X] Provide a metadata header in JSON that tracks such info and a version @@ -22,7 +22,7 @@ MGamma can convert between different formats. => https://kbroman.org/qtl2/assets/vignettes/input_files.html -* [ ] Write kinship lmdb as floats (half size) +* [X] Write kinship lmdb as floats (half size) * [X] Add individual names as first column in kinship rows (implemented as plain unsigned ints for now) * [ ] Somehow find the names for individuals? Is there a file format for that? * [X] If symmetric only store half the data |