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| author | Arun Isaac | 2023-03-14 19:11:46 +0000 |
|---|---|---|
| committer | Arun Isaac | 2023-03-14 19:12:15 +0000 |
| commit | af11754981f8c914130a606de2b3653d7b2a8e52 (patch) | |
| tree | 341a25e20f43dbad25aae9b1969c04da1e745337 /issues/sample-data-caching-problem | |
| parent | 44c09e1d89b3a708fa4bb1eb6cf8e6ef976ddfa1 (diff) | |
| download | gn-gemtext-af11754981f8c914130a606de2b3653d7b2a8e52.tar.gz | |
Add gmi extension to issue files without one.
Diffstat (limited to 'issues/sample-data-caching-problem')
| -rw-r--r-- | issues/sample-data-caching-problem | 19 |
1 files changed, 0 insertions, 19 deletions
diff --git a/issues/sample-data-caching-problem b/issues/sample-data-caching-problem deleted file mode 100644 index bf3078c..0000000 --- a/issues/sample-data-caching-problem +++ /dev/null @@ -1,19 +0,0 @@ - -# sample data caching bug - -When we cache sample data (mainly for features like correlations), it doesn't take into account changes in the sample list (which is derived from the .geno file). - -While this isn't frequently a problem, it was recently encountered with the BXD-Longevity group (which has had a number of recent changes to its .geno file, including changing the order of cases/samples, which basically rendered the cached sample data completely wrong) - -The fix to this is probably just to include the last updated time-stamp for the .geno file when caching. I'll probably do this in the next few days (maybe later today). - -The relevant caching code is here - https://github.com/genenetwork/genenetwork2/blob/2c22e593c59a9b4f9129a2e669443709d9c5154a/wqflask/base/data_set.py#L1288-L1317 - - -# Tags - -* assigned: zsloan,alex -* priority: medium -* type: bug -* status: open -* keywords: correlation,caching
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