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| author | Munyoki Kilyungi | 2022-10-12 16:36:06 +0300 |
|---|---|---|
| committer | Munyoki Kilyungi | 2022-10-12 16:36:06 +0300 |
| commit | e9a94bdd6dbac9675e39a18d0232634ee2225d1c (patch) | |
| tree | 5b48467089f2201e4e8195c2f6659779cc278053 | |
| parent | fd7bf637e9962977e18cdd0f298cb8470fe532e0 (diff) | |
| download | gn-gemtext-e9a94bdd6dbac9675e39a18d0232634ee2225d1c.tar.gz | |
Fix mark-up content
* issues/add-mouse-data-from-klaus.gmi: Rename the header. Remove
time-stamps. Make paragraphs one line to align with gem-text specs.
| -rw-r--r-- | issues/add-mouse-data-from-klaus.gmi | 19 |
1 files changed, 4 insertions, 15 deletions
diff --git a/issues/add-mouse-data-from-klaus.gmi b/issues/add-mouse-data-from-klaus.gmi index 0df02f8..55330b2 100644 --- a/issues/add-mouse-data-from-klaus.gmi +++ b/issues/add-mouse-data-from-klaus.gmi @@ -6,10 +6,9 @@ * priority: high * status: in progress -### Notes: Thu 30 Jun 2022 17:38:59 EAT +### Description -Klaus' recently shared with us some mouse data. -Here's a snip of how that looks like: +Klaus' recently shared with us some mouse data. Here's a snip of how that looks like: ``` mouse_ID BW day strain sex inf_dose animal.no. @@ -25,17 +24,7 @@ mouse_ID BW day strain sex inf_dose animal.no 250 CC001_m_1 90.42 perc_d06 CC001 m 10 FFU 1 ``` -I've been working on adding the above to the GN2 database. -The current challenge I have is that this data is Time Series---for the same strain, we have values indexed by time. -Also, we tag data by "animal.no." and "sex". -So for a male version of "CC001" with animal number 1, we have "CC001_m_1". -This is a problem---storing TS data---that Rob/Suheeta have highlighted in the past. -How do we go about doing this? -Currently, in GN2 we store averages of the aforementioned data. -This doesn't work out well for us: we don't have, AFAIU, a concept for "animal.no." -I would suggest we use lmdb to store this data, and work out a way to integrate it with the rest of GN2---so that we display this info on the main page. - -### Notes: Thu 30 Jun 2022 21:39:15 EAT +I've been working on adding the above to the GN2 database. The current challenge I have is that this data is Time Series---for the same strain, we have values indexed by time. Also, we tag data by "animal.no." and "sex". So for a male version of "CC001" with animal number 1, we have "CC001_m_1". This is a problem---storing TS data---that Rob/Suheeta have highlighted in the past. How do we go about doing this? Currently, in GN2 we store averages of the aforementioned data. This doesn't work out well for us: we don't have, AFAIU, a concept for "animal.no." I would suggest we use lmdb to store this data, and work out a way to integrate it with the rest of GN2 - so that we display this info on the main page. Here's how to extract the data from the provided data-set: @@ -63,7 +52,7 @@ dat10 50 BXD 6_5 89.03000 d1 [...] ``` -### Notes: Thu 30 Jun 2022 21:42:39 EAT + Some comments from Zach: ``` |