Pjotr notes

4 files changed, 35 insertions, 3 deletions

diff --git a/issues/genenetwork1/python2.4-2.7-upgrade b/issues/genenetwork1/python2.4-2.7-upgrade
new file mode 100644
index 0000000..d5dc7a9
--- /dev/null
+++ b/issues/genenetwork1/python2.4-2.7-upgrade
@@ -0,0 +1,17 @@
+# Upgrading from python 2.4 to 2.7
+
+It may be a good idea to upgrade GN1 from 2.4 to 2.7. These links should help:
+
+=> https://docs.python.org/release/2.5/whatsnew/porting.html
+=> https://docs.python.org/3/whatsnew/2.6.html#porting-to-python-2-6
+=> https://docs.python.org/3/whatsnew/2.7.html#porting-to-python-2-7
+
+The main challenge will be to see if some of the shared libraries will work that we have in binary form (only). Test coverage is not so important - as long as we can fix stuff. Also the Apache module may be a bit different. Important to try and load that first.
+
+Note that GN1 also uses PHP5(?).
+
+# Tasks
+
+* [ ] test python 2.7 with apache
+* [ ] run GN1
+* [ ] fix issues as we go along
diff --git a/topics/starting_gn1.gmi b/topics/starting_gn1.gmi
index 6e8ffa5..3a70add 100644
--- a/topics/starting_gn1.gmi
+++ b/topics/starting_gn1.gmi
@@ -2,7 +2,11 @@
 
 On tux01 GN1 is running inside a Guix container.
 
-## Updating on lily
+Start a screen and run the guix deploy script. See the README file in
+
+gn1@tux01:~/production/gnshare/gn
+
+## Updating mariadb connection on lily
 
 ```
    restart apache in lily
diff --git a/topics/systems/dns-changes.gmi b/topics/systems/dns-changes.gmi
index 75f9333..c83c4eb 100644
--- a/topics/systems/dns-changes.gmi
+++ b/topics/systems/dns-changes.gmi
@@ -33,3 +33,8 @@ We are moving thing to a new DNS hosting service. We have accounts on both. To m
   + dig systemsgenetics.org +trace
   + whois systemsgenetics.org (check for privacy setting!)
   + https://dnssec-analyzer.verisignlabs.com/genenetwork.org
+
+For UTHSC services the following primary DNS should be used:
+
+* UTDNS1.UTHSC.EDU
+* UTDNS2.UTHSC.EDU
diff --git a/topics/systems/gn-services.gmi b/topics/systems/gn-services.gmi
index 0cacf25..7c032bd 100644
--- a/topics/systems/gn-services.gmi
+++ b/topics/systems/gn-services.gmi
@@ -22,14 +22,20 @@ curl localhost:8080/version
 ```
 curl http://localhost:8000/gene/aliases/BRCA2
 ["FACD","FAD","FANCD","BROVCA2","FAD1","FANCD1","BRCC2","GLM3","PNCA2","XRCC11"]
+curl https://luna.genenetwork.org/gn3/
+[ "Hello GeneNetwork3!"  ]
 ```
+
 3. genenetwork3 (python3)
 
 ```
-curl https://luna.genenetwork.org/gn3/
-[ "Hello GeneNetwork3!"  ]
+curl localhost:8087/api/version
+"1.0"
+
 ```
 
+On epysode it is running on 8081
+
 ## Notes
 
 We track services now on