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authorEfraim Flashner2021-09-19 14:50:31 +0300
committerEfraim Flashner2021-09-19 14:50:31 +0300
commit06569bf2dc6db0d7bb7b2b94d815de8935f7c90e (patch)
tree4991b496b0432cd3a3fe5d99c9df4550bba852b5
parent194be64cf1b1b3ee224cba7312c76d835a77cbc8 (diff)
downloadgn-gemtext-06569bf2dc6db0d7bb7b2b94d815de8935f7c90e.tar.gz
pairscan update
-rw-r--r--issues/genenetwork1/gn1-pairscan.gmi15
1 files changed, 15 insertions, 0 deletions
diff --git a/issues/genenetwork1/gn1-pairscan.gmi b/issues/genenetwork1/gn1-pairscan.gmi
index 9d90bc1..cb9ca49 100644
--- a/issues/genenetwork1/gn1-pairscan.gmi
+++ b/issues/genenetwork1/gn1-pairscan.gmi
@@ -81,3 +81,18 @@ add the binary blob to GN1 and we pray it keeps working?
With gn1.genenetwork.org test by selecting the hippocampus dataset,
look for 'shh' gene, click 'pair scan' on the mapping page and
'compute'.
+
+# Update from Efraim
+
+I have copied the previous version of direct.so to IPFS, it is available
+at QmYUZiuAP6DJeubu69JqvRWSsn53qCZCS3FkRWgTowtWkA. Note that it is direct.so
+itself. As of commit
+
+```
+gn: Use known good binary version of direct.so for genenetwork1
+```
+
+we are now using that for genenetwork1. Patchelf makes it refer to the correct
+libstdc++.so.6 (namely one provided by Guix) so we don't need to worry about it
+being specifically propagated. I'm having trouble actually running the
+genenetwork1 container so Pjotr said he'd test it out.