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Diffstat (limited to 'general/datasets/Mdppublish')
| -rw-r--r-- | general/datasets/Mdppublish/citation.rtf | 17 | ||||
| -rw-r--r-- | general/datasets/Mdppublish/summary.rtf | 17 |
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diff --git a/general/datasets/Mdppublish/citation.rtf b/general/datasets/Mdppublish/citation.rtf new file mode 100644 index 0000000..ace9bc3 --- /dev/null +++ b/general/datasets/Mdppublish/citation.rtf @@ -0,0 +1,17 @@ +<p>When mentioning the MPD please use and cite this URL: http://www.jax.org/phenome. This is the MPD's best known location and is usually preferable to the longer dynamic system URLs that may appear in URL address fields.</p>
+
+<p>Publications:</p>
+
+<p>Grubb SC, Churchill GA, Bogue MA. A collaborative database of inbred mouse strain characteristics. Bioinformatics. 2004 Nov 1;20(16):2857-9. Epub 2004 May 6. PMID: 15130929</p>
+
+<p>Bogue MA, Grubb SC. The mouse phenome project. Genetica. 2004 Sep;122:71-74. PMID: 15619963</p>
+
+<p>To cite specific phenotyping data in the MPD, a format similar to this may be used. (Please be sure you have read and agree with our user agreement for taking and using MPD data.)</p>
+
+<p>Investigators. Project Title. MPD accession#. Mouse Phenome Database Web Site, The Jackson Laboratory, Bar Harbor, Maine USA. World Wide Web (URL: http://www.jax.org/phenome, month and year of download ).</p>
+
+<p>Example:</p>
+
+<p>Wahlsten D, Crabbe JC. Comparative study of activity, anxiety, motor learning, and spatial learning in two laboratories. MPD:108. Mouse Phenome Database Web Site, The Jackson Laboratory, Bar Harbor, ME USA. World Wide Web (URL: http://www.jax.org/phenome, July 2004).</p>
+
+<p>Each phenotyping project in the MPD is assigned an accession number having the format MPD:NNN, where NNN is an integer. Accession numbers are displayed in the projects index and the individual project detail pages.</p>
diff --git a/general/datasets/Mdppublish/summary.rtf b/general/datasets/Mdppublish/summary.rtf new file mode 100644 index 0000000..a5cb4f6 --- /dev/null +++ b/general/datasets/Mdppublish/summary.rtf @@ -0,0 +1,17 @@ +<p>MDP: The great majority of data on the Mouse Diversity Panel is taken from the Phenome Project. Unlike the PHone Project, the MDP also includes limited data from the older literature.</p>
+
+<p>These data were downloaded from the <a href="http://phenome.jax.org/pub-cgi/phenome/mpdcgi?rtn=docs/home" target="other">Mouse Phenome Database</a> at The Jackson Laboratory in June 2006 and implemented in GeneNetwork July 2006.</p>
+
+<p>The Mouse Phenome Database (MPD) and several other large data sets are being integrated into the GeneNetwork's <strong>Mouse Diversity Panel</strong>. To access these new data sets please select "MOUSE-GROUP-Mouse Diversity Panel". The Mouse Diversity Panel will eventually includes the MPD, additional strain data sets extracted from the published literature, the Wellcome Trust-CTC SNP collection, and several large gene expression data sets, including those for whole brain, hippocampus, cerebellum, and eye. (Implemented by Jintao Wang and Evan G. Williams.)</p>
+
+<p> </p>
+
+<p><img src="/images/upload/MDP_Search.png" /></p>
+
+<p><small><strong>Legend:</strong> Access to the new Mouse Diversity Panel data sets. </small></p>
+
+<p> </p>
+
+<p><img src="/images/upload/WBCs_MDP_female.gif" /></p>
+
+<p><small><strong>Legend:</strong> Bar chart of white blood cell counts across 43 strains of mice taken from the Mouse Diversity Panel. Virutally all of the phenotype data are provided from the <a class="fs14" href="http://www.jax.org/phenome" target="_empty">Mouse Phenome Project</a>. </small></p>
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