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2024-08-15fix: bugs in masquerade apiJohn Nduli
2024-08-05Fix linting errors.Frederick Muriuki Muriithi
2024-08-01Handle generic exception and return a value.enable-key-rotationFrederick Muriuki Muriithi
2024-07-31Ignore warning from mypy.Frederick Muriuki Muriithi
2024-07-31Remove obsoleted SSL_PRIVATE_KEY configurationFrederick Muriuki Muriithi
With the key rotation in place, eliminate the use of the SSL_PRIVATE_KEY configuration which pointed to a specific non-changing JWK.
2024-07-17Add non-interactive script to assign make data public by default.Frederick Muriuki Muriithi
2024-06-25Roles: Get rid of use of GroupRole; use Role directly for resourcesFrederick Muriuki Muriithi
The GroupRole idea was flawed, and led to a critical bug that would have allowed privilege escalation. This uses the Role directly acting on a specific resource when assigning said role to a user.
2024-06-20Reorganise test fixtures. Fix tests and issues caught.Frederick Muriuki Muriithi
Reorganise test fixtures to more closely follow the design of the auth system. Fix the broken tests due to refactors and fix all issues caught by the running tests.
2024-06-18fix mypy errorsFrederick Muriuki Muriithi
2024-06-17Fix mypy errorsFrederick Muriuki Muriithi
2024-06-17Remove obsolete endpoint.Frederick Muriuki Muriithi
2024-06-17Fix linting errorsFrederick Muriuki Muriithi
2024-06-17Remove deprecated endpoint.Frederick Muriuki Muriithi
2024-06-17Retrieve complete list of a users roles on a particular resource.Frederick Muriuki Muriithi
2024-06-17Fix linting errors.Frederick Muriuki Muriithi
2024-06-17Create a resource role.Frederick Muriuki Muriithi
2024-06-17Don't save the resource-owner role as a resource roleFrederick Muriuki Muriithi
The 'resource-owner' role is a system-default role that applies to most resources, but should not be editable by users. This commit removes the code that was linking the role with each resource, leading it to being presented to the user as a editable role.
2024-06-17Use the form's json attribute to retrieve sent dataFrederick Muriuki Muriithi
The system uses JSON as the default communication format, so we use the form's json attribute to get any data sent.
2024-06-11Fix typo.Frederick Muriuki Muriithi
2024-06-11Temporary fix to retrieve users with read access to resource.Frederick Muriuki Muriithi
2024-06-11List users assigned a particular role on a specific resource.handle-role-privilege-escalationFrederick Muriuki Muriithi
2024-06-11Import the symbols we use in the module directly.Frederick Muriuki Muriithi
Import the modules directly to help with reducing line-length and unnecessary typing.
2024-06-11Unassign privilege from resource role.Frederick Muriuki Muriithi
2024-06-10Fetch a role by its ID.Frederick Muriuki Muriithi
2024-06-10Use new db resultset conversion functions.Frederick Muriuki Muriithi
2024-06-10Provide resource roles endpointFrederick Muriuki Muriithi
Provide an endpoint that returns all the roles that a particular user has on a specific resource.
2024-06-10Share reusable functionFrederick Muriuki Muriithi
2024-06-07Replace `…/group/roles` endpoint with `…/resource/…/roles` endpoint.Frederick Muriuki Muriithi
The `…/group/roles` endpoint relied on the now deleted `group_roles` table that caused the implementation to be prone to privilege escalation attacks. This commit provides the `…/resource/…/roles` endpoint that provides the required functionality without the exposure.
2024-06-07Update role assignment: user resource_roles tableFrederick Muriuki Muriithi
We no longer use the group_roles table, and have moved to the less privilege-escalation-prone resource_roles table. This commit updates the queries to use the newer resource_roles table.
2024-06-06Add deprecation warning to /group-privileges endpoint function.Frederick Muriuki Muriithi
2024-06-05Bug: Point to correct key to avoid errorsFrederick Muriuki Muriithi
2024-06-03Move user creation from db resultset into static methodFrederick Muriuki Muriithi
Creation of a User object from the database resultset will mostly be the same. This commit moves the repetitive code into a static method that can be called wherever we need it. This improves maintainability, since we only ever need to do an update in one place now.
2024-04-30Create a JWT token when querying a user's role an a resource.Munyoki Kilyungi
* gn_auth/auth/authorisation/resources/views.py: Import time. (get_user_roles_on_resource): Add a JWT bearer token to the responses's header. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-04-24Move the errors module up one level to break circular dependencies.Frederick Muriuki Muriithi
2024-04-23pylint: Fix linting errors.Frederick Muriuki Muriithi
2024-04-02Remove unused group argument.Frederick Muriuki Muriithi
2024-03-30Update call: Drop unused argument in call.Frederick Muriuki Muriithi
2024-03-25Flatten roles list in "get_user_roles_on_resource."Munyoki Kilyungi
* gn_auth/auth/authorisation/resources/views.py: Import operator. (get_user_roles_on_resource): Flatten roles list. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-03-21Return empty tuples when metadata is queried for data.Munyoki Kilyungi
* gn_auth/auth/authorisation/resources/models.py (resource_data): A metadata resource is not linked to any data so we return an empty tuple. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-03-21Add extra endpoint to get user authorisation given a resource name.Munyoki Kilyungi
* gn_auth/auth/authorisation/resources/models.py (user_roles_on_resources): New function. * gn_auth/auth/authorisation/resources/views.py (resources_authorisation): New endpoint. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-03-21Revert "Add an extra endpoint for metadata authorisation."Munyoki Kilyungi
This reverts commit f5e833c0d72eaec80425203b15210ed304cc4811. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-03-13Remove unused imports.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-03-13Define Resource/ResourceCategory using frozen dataclass.Munyoki Kilyungi
* gn_auth/auth/authorisation/resources/base.py: Import dataclass and asdict. Remove NamedTuple and dictify. (ResourceCategory): Use frozen dataclass. (ResourceCategory.dictify): Delete. (Resource): Use frozen dataclass. (Resource.dictify): Delete. * gn_auth/auth/authorisation/resources/models.py: Delete dictify import. (assign_resource_user): Replace dictify with asdict. (unassign_resource_user): Ditto. * gn_auth/auth/authorisation/resources/views.py: Import asdict. Remove dictify import. (list_resource_categories): Replace dictify with asdict. (create_resource): Ditto. (view_resource): Ditto. (__safe_get_requests_page__): Ditto. * gn_auth/auth/authorisation/users/views.py: (user_resources): Replace dictify with asdict. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-03-13Auto-pep8 this file.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-03-13Define Privilege/Role using frozen dataclass.Munyoki Kilyungi
* gn_auth/auth/authorisation/privileges.py: Import dataclass. Remove NamedTuple import. (Privilege): Use frozen dataclass. (Privelege.dictify): Delete. * gn_auth/auth/authorisation/resources/groups/views.py: Import dataclasses.asdict. (group_privileges): Replace dictify with asdict. (add_priv_to_role): Ditto. (delete_priv_from_role): Ditto. * gn_auth/auth/authorisation/resources/models.py: (assign_resource_user): Replace dictify with asdict. (unassign_resource_user): Ditto. * gn_auth/auth/authorisation/resources/system/views.py: Import dataclasses.asdict. Remove dictify import. (system_roles): Replace dictify with asdict. * gn_auth/auth/authorisation/resources/views.py: (resource_users): Replace dictify with asdict. (resources_authorisation): Ditto. * gn_auth/auth/authorisation/roles/models.py: Remove dictify and NameTuple import. (Role): Use frozen dataclass. (Role.dictify): Replace dictify(priv) with asdict(priv). * gn_auth/auth/authorisation/roles/views.py: Import dataclasses.asdict. Remove dictify import. (view_role): Replace dictify with asdict. * gn_auth/auth/authorisation/users/views.py: (user_roles): Replace dictify with asdict. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-03-13Define GroupRole using frozen dataclass.Munyoki Kilyungi
* gn_auth/auth/authorisation/resources/groups/models.py: Import dataclasses.asdict. Remove dictify import. (GroupRole): Use frozen dataclass. (GroupRole.dictify): Replace dictify(...) with self.role.dictify(). * gn_auth/auth/authorisation/resources/groups/views.py: (group_roles): Replace dictify with asdict. (view_group_role): Ditto. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-03-13Define Group using a frozen dataclass.Munyoki Kilyungi
* gn_auth/auth/authorisation/data/genotypes.py: Import dataclasses.asdict. (link_genotype_data): Replace dictify with asdict. * gn_auth/auth/authorisation/data/mrna.py: Import dataclasses.asdict. (link_mrna_data): Replace dictify with asdict. * gn_auth/auth/authorisation/data/phenotypes.py: Import dataclasses.asdict. (link_phenotype_data): Replace dictify with asdict. * gn_auth/auth/authorisation/resources/groups/models.py: Import dataclass. (Group): Use frozen dataclass. (Group.dictify): Delete. (GroupRole.dictify): Replace dictify with asdict. * gn_auth/auth/authorisation/resources/groups/views.py: Import dataclasses.asdict. Remove dictify import. (list_groups): Replace dictify with asdict. (create_group): Ditto. * gn_auth/auth/authorisation/resources/views.py: (resource_users): Replace dictify with asdict. * gn_auth/auth/authorisation/users/views.py: Import dataclasses.asdict. Remove dictify import. (user_details): Replace dictify with asdict. (user_group): Ditto. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-03-13Define User using a frozen dataclass.Munyoki Kilyungi
* gn_auth/auth/authentication/users.py: Import dataclass. Remove NamedTuple and Tuple import. (User): Use a frozen dataclass. (User.get_user_id): Delete. (User.dictify): Ditto. * gn_auth/auth/authorisation/data/views.py: Import dataclasses.dict. (authorisation): Replace user._asdict() with asdict(user). (metadata_resources): Ditto. * gn_auth/auth/authorisation/resources/groups/views.py: (group_members): Replace dictify with asdict. * gn_auth/auth/authorisation/resources/models.py: Import dataclasses.asdict. (assign_resource_user): Replace dictify(user) with asdict(user). (unassign_resource_user): Ditto. * gn_auth/auth/authorisation/resources/views.py: (resource_users): Replace dictify with asdict. * gn_auth/auth/authorisation/users/masquerade/views.py: Import dataclasses.asdict. (masquerade): Replace masq_user._asdict() with asdict(masq_user). * gn_auth/auth/authorisation/users/views.py: (list_all_users): Replace dictify with asdict. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-03-04Add an extra endpoint for metadata authorisation.Munyoki Kilyungi
* gn_auth/auth/authorisation/data/views.py: (metadata_resources): New end-point for authorising metadata data. * gn_auth/auth/authorisation/resources/models.py: Import sqlite3.Row. (__metadata_resource_data__): New function. (__assign_resource_owner_role__): Add __metadata_resource_data__ to the "resource_data_function" map. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2023-11-23Scripts: Update script for newer db schemaFrederick Muriuki Muriithi
The schema changed a while back, and the script that is used to make all existing data public needs to be updated for the new schema. This commit does exactly that.
generated by cgit v1.2.3 (git 2.44.0) at 2024-11-10 01:43:29 +0000