diff options
Diffstat (limited to 'migrations/auth/20230404_01_VKxXg-create-linked-genotype-data-table.py')
-rw-r--r-- | migrations/auth/20230404_01_VKxXg-create-linked-genotype-data-table.py | 29 |
1 files changed, 29 insertions, 0 deletions
diff --git a/migrations/auth/20230404_01_VKxXg-create-linked-genotype-data-table.py b/migrations/auth/20230404_01_VKxXg-create-linked-genotype-data-table.py new file mode 100644 index 0000000..02e8718 --- /dev/null +++ b/migrations/auth/20230404_01_VKxXg-create-linked-genotype-data-table.py @@ -0,0 +1,29 @@ +""" +Create linked genotype data table +""" + +from yoyo import step + +__depends__ = {'20230322_02_Ll854-create-phenotype-resources-table'} + +steps = [ + step( + """ + CREATE TABLE IF NOT EXISTS linked_genotype_data + -- Link genotype data in MariaDB to user groups in auth system + ( + data_link_id TEXT NOT NULL PRIMARY KEY, -- A new ID for the auth system + group_id TEXT NOT NULL, -- The user group the data is linked to + SpeciesId TEXT NOT NULL, -- The species in MariaDB + InbredSetId TEXT NOT NULL, -- The traits group in MariaDB + GenoFreezeId TEXT NOT NULL, -- The dataset Id in MariaDB + dataset_name TEXT, -- dataset Name in MariaDB + dataset_fullname, -- dataset FullName in MariaDB + dataset_shortname, -- dataset ShortName in MariaDB + FOREIGN KEY (group_id) + REFERENCES groups(group_id) ON UPDATE CASCADE ON DELETE RESTRICT + UNIQUE (SpeciesId, InbredSetId, GenoFreezeId) + ) WITHOUT ROWID + """, + "DROP TABLE IF EXISTS linked_genotype_data") +] |