diff options
Diffstat (limited to 'gn_auth/auth/authorisation')
-rw-r--r-- | gn_auth/auth/authorisation/data/genotypes.py | 2 | ||||
-rw-r--r-- | gn_auth/auth/authorisation/data/mrna.py | 2 | ||||
-rw-r--r-- | gn_auth/auth/authorisation/resources/genotypes/models.py | 2 | ||||
-rw-r--r-- | gn_auth/auth/authorisation/resources/inbredset/models.py | 2 | ||||
-rw-r--r-- | gn_auth/auth/authorisation/resources/models.py | 2 | ||||
-rw-r--r-- | gn_auth/auth/authorisation/resources/views.py | 2 | ||||
-rw-r--r-- | gn_auth/auth/authorisation/roles/models.py | 2 | ||||
-rw-r--r-- | gn_auth/auth/authorisation/users/masquerade/models.py | 2 | ||||
-rw-r--r-- | gn_auth/auth/authorisation/users/views.py | 2 |
9 files changed, 9 insertions, 9 deletions
diff --git a/gn_auth/auth/authorisation/data/genotypes.py b/gn_auth/auth/authorisation/data/genotypes.py index 7cae91a..ddb0add 100644 --- a/gn_auth/auth/authorisation/data/genotypes.py +++ b/gn_auth/auth/authorisation/data/genotypes.py @@ -22,7 +22,7 @@ def linked_genotype_data(conn: authdb.DbConnection) -> Iterable[dict]: "You do not have sufficient privileges to link data to (a) " "group(s)."), oauth2_scope="profile group resource") -def ungrouped_genotype_data(# pylint: disable=[too-many-arguments] +def ungrouped_genotype_data(# pylint: disable=[too-many-arguments, too-many-positional-arguments] authconn: authdb.DbConnection, gn3conn: gn3db.Connection, search_query: str, selected: tuple[dict, ...] = tuple(), limit: int = 10000, offset: int = 0) -> tuple[ diff --git a/gn_auth/auth/authorisation/data/mrna.py b/gn_auth/auth/authorisation/data/mrna.py index 82a0f82..0cc644e 100644 --- a/gn_auth/auth/authorisation/data/mrna.py +++ b/gn_auth/auth/authorisation/data/mrna.py @@ -22,7 +22,7 @@ def linked_mrna_data(conn: authdb.DbConnection) -> Iterable[dict]: "You do not have sufficient privileges to link data to (a) " "group(s)."), oauth2_scope="profile group resource") -def ungrouped_mrna_data(# pylint: disable=[too-many-arguments] +def ungrouped_mrna_data(# pylint: disable=[too-many-arguments, too-many-positional-arguments] authconn: authdb.DbConnection, gn3conn: gn3db.Connection, search_query: str, selected: tuple[dict, ...] = tuple(), limit: int = 10000, offset: int = 0) -> tuple[ diff --git a/gn_auth/auth/authorisation/resources/genotypes/models.py b/gn_auth/auth/authorisation/resources/genotypes/models.py index e8dca9b..464537e 100644 --- a/gn_auth/auth/authorisation/resources/genotypes/models.py +++ b/gn_auth/auth/authorisation/resources/genotypes/models.py @@ -68,7 +68,7 @@ def attach_resources_data( return __attach_data__(cursor.fetchall(), resources) -def insert_and_link_data_to_resource(# pylint: disable=[too-many-arguments] +def insert_and_link_data_to_resource(# pylint: disable=[too-many-arguments, too-many-positional-arguments] cursor, resource_id: uuid.UUID, group_id: uuid.UUID, diff --git a/gn_auth/auth/authorisation/resources/inbredset/models.py b/gn_auth/auth/authorisation/resources/inbredset/models.py index de1c18a..64d41e3 100644 --- a/gn_auth/auth/authorisation/resources/inbredset/models.py +++ b/gn_auth/auth/authorisation/resources/inbredset/models.py @@ -62,7 +62,7 @@ def assign_inbredset_group_owner_role( return resource -def link_data_to_resource(# pylint: disable=[too-many-arguments] +def link_data_to_resource(# pylint: disable=[too-many-arguments, too-many-positional-arguments] cursor: sqlite3.Cursor, resource_id: UUID, species_id: int, diff --git a/gn_auth/auth/authorisation/resources/models.py b/gn_auth/auth/authorisation/resources/models.py index c1748f1..d136fec 100644 --- a/gn_auth/auth/authorisation/resources/models.py +++ b/gn_auth/auth/authorisation/resources/models.py @@ -39,7 +39,7 @@ from .phenotypes.models import ( @authorised_p(("group:resource:create-resource",), error_description="Insufficient privileges to create a resource", oauth2_scope="profile resource") -def create_resource(# pylint: disable=[too-many-arguments] +def create_resource(# pylint: disable=[too-many-arguments, too-many-positional-arguments] cursor: sqlite3.Cursor, resource_name: str, resource_category: ResourceCategory, diff --git a/gn_auth/auth/authorisation/resources/views.py b/gn_auth/auth/authorisation/resources/views.py index 1c4104a..29ab3ed 100644 --- a/gn_auth/auth/authorisation/resources/views.py +++ b/gn_auth/auth/authorisation/resources/views.py @@ -137,7 +137,7 @@ def view_resource_data(resource_id: UUID) -> Response: with require_oauth.acquire("profile group resource") as the_token: db_uri = app.config["AUTH_DB"] count_per_page = __safe_get_requests_count__("count_per_page") - offset = (__safe_get_requests_page__("page") - 1) + offset = __safe_get_requests_page__("page") - 1 with db.connection(db_uri) as conn: resource = resource_by_id(conn, the_token.user, resource_id) return jsonify(resource_data( diff --git a/gn_auth/auth/authorisation/roles/models.py b/gn_auth/auth/authorisation/roles/models.py index 2729b3b..6faeaca 100644 --- a/gn_auth/auth/authorisation/roles/models.py +++ b/gn_auth/auth/authorisation/roles/models.py @@ -271,7 +271,7 @@ def role_by_id(conn: db.DbConnection, role_id: UUID) -> Optional[Role]: _roles = db_rows_to_roles(results) if len(_roles) > 1: - raise Exception("Data corruption: Expected a single role.") + raise Exception("Data corruption: Expected a single role.")# pylint: disable=[broad-exception-raised] return _roles[0] diff --git a/gn_auth/auth/authorisation/users/masquerade/models.py b/gn_auth/auth/authorisation/users/masquerade/models.py index a155899..5c11f34 100644 --- a/gn_auth/auth/authorisation/users/masquerade/models.py +++ b/gn_auth/auth/authorisation/users/masquerade/models.py @@ -20,7 +20,7 @@ from ....db import sqlite3 as db from ....authentication.users import User from ....authentication.oauth2.models.oauth2token import OAuth2Token -__FIVE_HOURS__ = (60 * 60 * 5) +__FIVE_HOURS__ = 60 * 60 * 5 def can_masquerade(func): """Security decorator.""" diff --git a/gn_auth/auth/authorisation/users/views.py b/gn_auth/auth/authorisation/users/views.py index 7adcd06..2140928 100644 --- a/gn_auth/auth/authorisation/users/views.py +++ b/gn_auth/auth/authorisation/users/views.py @@ -196,7 +196,7 @@ def register_user() -> Response: current_app.logger.error(traceback.format_exc()) raise(UserRegistrationError(f"Email Error: {str(enve)}")) from enve - raise Exception( + raise Exception(# pylint: disable=[broad-exception-raised] "unknown_error", "The system experienced an unexpected error.") def delete_verification_code(cursor, code: str): |