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authorFrederick Muriuki Muriithi2023-08-07 07:19:16 +0300
committerFrederick Muriuki Muriithi2023-08-07 09:26:11 +0300
commitc9f35e54d5d894051ceb446d1dce54915dcb20f6 (patch)
treec2bfc7bd6b7feab4b7418770f05e7d6ab43623da /gn_auth/auth/authorisation/data
parentb7f5cd0d788748559ca5e9768f3ea35d45442ef6 (diff)
downloadgn-auth-c9f35e54d5d894051ceb446d1dce54915dcb20f6.tar.gz
Update module name/path
Change from gn3 to gn_auth
Diffstat (limited to 'gn_auth/auth/authorisation/data')
-rw-r--r--gn_auth/auth/authorisation/data/genotypes.py10
-rw-r--r--gn_auth/auth/authorisation/data/mrna.py10
-rw-r--r--gn_auth/auth/authorisation/data/phenotypes.py10
-rw-r--r--gn_auth/auth/authorisation/data/views.py34
4 files changed, 32 insertions, 32 deletions
diff --git a/gn_auth/auth/authorisation/data/genotypes.py b/gn_auth/auth/authorisation/data/genotypes.py
index 8f901a5..41822a1 100644
--- a/gn_auth/auth/authorisation/data/genotypes.py
+++ b/gn_auth/auth/authorisation/data/genotypes.py
@@ -4,11 +4,11 @@ from typing import Iterable
from MySQLdb.cursors import DictCursor
-import gn3.auth.db as authdb
-import gn3.db_utils as gn3db
-from gn3.auth.dictify import dictify
-from gn3.auth.authorisation.checks import authorised_p
-from gn3.auth.authorisation.groups.models import Group
+import gn_auth.auth.db as authdb
+import gn_auth.db_utils as gn3db
+from gn_auth.auth.dictify import dictify
+from gn_auth.auth.authorisation.checks import authorised_p
+from gn_auth.auth.authorisation.groups.models import Group
def linked_genotype_data(conn: authdb.DbConnection) -> Iterable[dict]:
"""Retrive genotype data that is linked to user groups."""
diff --git a/gn_auth/auth/authorisation/data/mrna.py b/gn_auth/auth/authorisation/data/mrna.py
index bdfc5c1..0b08571 100644
--- a/gn_auth/auth/authorisation/data/mrna.py
+++ b/gn_auth/auth/authorisation/data/mrna.py
@@ -3,11 +3,11 @@ import uuid
from typing import Iterable
from MySQLdb.cursors import DictCursor
-import gn3.auth.db as authdb
-import gn3.db_utils as gn3db
-from gn3.auth.dictify import dictify
-from gn3.auth.authorisation.checks import authorised_p
-from gn3.auth.authorisation.groups.models import Group
+import gn_auth.auth.db as authdb
+import gn_auth.db_utils as gn3db
+from gn_auth.auth.dictify import dictify
+from gn_auth.auth.authorisation.checks import authorised_p
+from gn_auth.auth.authorisation.groups.models import Group
def linked_mrna_data(conn: authdb.DbConnection) -> Iterable[dict]:
"""Retrieve mRNA Assay data that is linked to user groups."""
diff --git a/gn_auth/auth/authorisation/data/phenotypes.py b/gn_auth/auth/authorisation/data/phenotypes.py
index ff98295..2f4c564 100644
--- a/gn_auth/auth/authorisation/data/phenotypes.py
+++ b/gn_auth/auth/authorisation/data/phenotypes.py
@@ -4,11 +4,11 @@ from typing import Any, Iterable
from MySQLdb.cursors import DictCursor
-import gn3.auth.db as authdb
-import gn3.db_utils as gn3db
-from gn3.auth.dictify import dictify
-from gn3.auth.authorisation.checks import authorised_p
-from gn3.auth.authorisation.groups.models import Group
+import gn_auth.auth.db as authdb
+import gn_auth.db_utils as gn3db
+from gn_auth.auth.dictify import dictify
+from gn_auth.auth.authorisation.checks import authorised_p
+from gn_auth.auth.authorisation.groups.models import Group
def linked_phenotype_data(
authconn: authdb.DbConnection, gn3conn: gn3db.Connection,
diff --git a/gn_auth/auth/authorisation/data/views.py b/gn_auth/auth/authorisation/data/views.py
index 8adf862..a25e9a2 100644
--- a/gn_auth/auth/authorisation/data/views.py
+++ b/gn_auth/auth/authorisation/data/views.py
@@ -10,31 +10,31 @@ from MySQLdb.cursors import DictCursor
from authlib.integrations.flask_oauth2.errors import _HTTPException
from flask import request, jsonify, Response, Blueprint, current_app as app
-import gn3.db_utils as gn3db
-from gn3 import jobs
-from gn3.commands import run_async_cmd
-from gn3.db.traits import build_trait_name
+import gn_auth.db_utils as gn3db
+from gn_auth import jobs
+from gn_auth.commands import run_async_cmd
+from gn_auth.db.traits import build_trait_name
-from gn3.auth import db
-from gn3.auth.db_utils import with_db_connection
+from gn_auth.auth import db
+from gn_auth.auth.db_utils import with_db_connection
-from gn3.auth.authorisation.checks import require_json
-from gn3.auth.authorisation.errors import InvalidData, NotFoundError
+from gn_auth.auth.authorisation.checks import require_json
+from gn_auth.auth.authorisation.errors import InvalidData, NotFoundError
-from gn3.auth.authorisation.groups.models import group_by_id
+from gn_auth.auth.authorisation.groups.models import group_by_id
-from gn3.auth.authorisation.users.models import user_resource_roles
+from gn_auth.auth.authorisation.users.models import user_resource_roles
-from gn3.auth.authorisation.resources.checks import authorised_for
-from gn3.auth.authorisation.resources.models import (
+from gn_auth.auth.authorisation.resources.checks import authorised_for
+from gn_auth.auth.authorisation.resources.models import (
user_resources, public_resources, attach_resources_data)
-from gn3.auth.authentication.users import User
-from gn3.auth.authentication.oauth2.resource_server import require_oauth
+from gn_auth.auth.authentication.users import User
+from gn_auth.auth.authentication.oauth2.resource_server import require_oauth
-from gn3.auth.authorisation.data.phenotypes import link_phenotype_data
-from gn3.auth.authorisation.data.mrna import link_mrna_data, ungrouped_mrna_data
-from gn3.auth.authorisation.data.genotypes import (
+from gn_auth.auth.authorisation.data.phenotypes import link_phenotype_data
+from gn_auth.auth.authorisation.data.mrna import link_mrna_data, ungrouped_mrna_data
+from gn_auth.auth.authorisation.data.genotypes import (
link_genotype_data, ungrouped_genotype_data)
data = Blueprint("data", __name__)