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| author | Pjotr Prins | 2025-09-23 11:25:38 +0200 |
|---|---|---|
| committer | Pjotr Prins | 2025-09-23 11:25:38 +0200 |
| commit | 91801bcffd69e77d163159ed71cd85c9db96f924 (patch) | |
| tree | 6616228c70fdac32e247c7ce0e5e8fc733badf5c | |
| parent | 6dea663e75de0ec1b90a96080a094814d3fc9980 (diff) | |
| download | gn-ai-91801bcffd69e77d163159ed71cd85c9db96f924.tar.gz | |
Add issue for hoot genome browser
| -rw-r--r-- | topics/genome-browser/hoot-genome-browser.gmi | 21 |
1 files changed, 21 insertions, 0 deletions
diff --git a/topics/genome-browser/hoot-genome-browser.gmi b/topics/genome-browser/hoot-genome-browser.gmi new file mode 100644 index 00000000..219fda50 --- /dev/null +++ b/topics/genome-browser/hoot-genome-browser.gmi @@ -0,0 +1,21 @@ +# Hoot Genome Browser + +Together with Andrew we have created a genome browser that runs in WASM. Safari recently (202509) added critical hoot support, so we should have it in all important browsers now! + +With this task tracker we want to embed the existing browser in GN and add tracks for mapped QTL. + +# Tags + +* assigned: andrewt, pjotrp +* priority: high +* status: open, in progress +* keywords: mapping + +# Tasks + +* [ ] Embed hoot browser in GN2 as a pilot +* + [ ] Guix package for JS and minimal JBrowse2? +* + [ ] Embedding code in GN2 +* [ ] Create two tracks for QTL comparisons - vector data available +* [ ] Create BED file for matched QTL - use SPARQL live? +* [ ] Annotated SNPs |