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"""This contains unit-tests for gn3.computations.diff"""
import unittest
import os
import pytest
from gn3.computations.diff import generate_diff
TESTDIFF = """3,4c3,4
< C57BL/6J,x,x,x
< BXD1,18.700,x,x
---
> C57BL/6J,19.000,x,x
> BXD1,15.700,x,x
6c6
< BXD11,18.900,x,x
---
> BXD11,x,x,x
"""
class TestDiff(unittest.TestCase):
"""Test cases for computations.diff"""
@pytest.mark.unit_test
def test_generate_diff(self):
"""Test that the correct diff is generated"""
data = os.path.join(os.path.dirname(__file__).split("unit")[0],
"test_data/trait_data_10007.csv")
edited_data = os.path.join(os.path.dirname(__file__).split("unit")[0],
"test_data/edited_trait_data_10007.csv")
self.assertEqual(generate_diff(data, edited_data), TESTDIFF)
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