1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
|
"""Fixtures and utilities for resource-related tests"""
import uuid
import pytest
from gn3.auth import db
from gn3.auth.authorisation.resources import Resource, ResourceCategory
from .group_fixtures import TEST_GROUPS
TEST_RESOURCES = (
Resource(TEST_GROUPS[0], uuid.UUID("26ad1668-29f5-439d-b905-84d551f85955"),
"ResourceG01R01",
ResourceCategory(uuid.UUID("48056f84-a2a6-41ac-8319-0e1e212cba2a"),
"genotype", "Genotype Dataset"),
True),
Resource(TEST_GROUPS[0], uuid.UUID("2130aec0-fefd-434d-92fd-9ca342348b2d"),
"ResourceG01R02",
ResourceCategory(uuid.UUID("548d684b-d4d1-46fb-a6d3-51a56b7da1b3"),
"phenotype", "Phenotype (Publish) Dataset"),
False),
Resource(TEST_GROUPS[0], uuid.UUID("e9a1184a-e8b4-49fb-b713-8d9cbeea5b83"),
"ResourceG01R03",
ResourceCategory(uuid.UUID("fad071a3-2fc8-40b8-992b-cdefe7dcac79"),
"mrna", "mRNA Dataset"),
False),
Resource(TEST_GROUPS[1], uuid.UUID("14496a1c-c234-49a2-978c-8859ea274054"),
"ResourceG02R01",
ResourceCategory(uuid.UUID("48056f84-a2a6-41ac-8319-0e1e212cba2a"),
"genotype", "Genotype Dataset"),
False),
Resource(TEST_GROUPS[1], uuid.UUID("04ad9e09-94ea-4390-8a02-11f92999806b"),
"ResourceG02R02",
ResourceCategory(uuid.UUID("fad071a3-2fc8-40b8-992b-cdefe7dcac79"),
"mrna", "mRNA Dataset"),
True))
@pytest.fixture(scope="function")
def test_resources(test_group):# pylint: disable=[redefined-outer-name]
"""fixture: setup test resources in the database"""
conn, _group = test_group
with db.cursor(conn) as cursor:
cursor.executemany(
"INSERT INTO resources VALUES (?,?,?,?,?)",
((str(res.group.group_id), str(res.resource_id), res.resource_name,
str(res.resource_category.resource_category_id),
1 if res.public else 0) for res in TEST_RESOURCES))
return (conn, TEST_RESOURCES)
@pytest.fixture(scope="function")
def fixture_user_resources(test_users_in_group, test_resources):# pylint: disable=[redefined-outer-name, unused-argument]
"""fixture: link users to roles and resources"""
conn, _resources = test_resources
## TODO: setup user roles
## TODO: attach user roles to specific resources
return conn
|
