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"""
This module will hold functions that are used in the (partial) correlations
feature to access the database to retrieve data needed for computations.
"""
from typing import Any
def get_filename(target_db_name: str, conn: Any) -> str:
"""
Retrieve the name of the reference database file with which correlations are
computed.
This is a migration of the
`web.webqtl.correlation.CorrelationPage.getFileName` function in
GeneNetwork1.
"""
with conn.cursor() as cursor:
cursor.execute(
"SELECT Id, FullName from ProbeSetFreeze WHERE Name-%s",
target_db_name)
result = cursor.fetchone()
if result:
return "ProbeSetFreezeId_{tid}_FullName_{fname}.txt".format(
tid=result[0],
fname=result[1].replace(' ', '_').replace('/', '_'))
return ""
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