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"""Procedures related gemma computations"""
import random
import string
def generate_random_n_string(n_length):
"""Generate a random string that is N chars long"""
return ''.join(random.choice(string.ascii_uppercase + string.digits)
for _ in range(n_length))
def generate_pheno_txt_file(trait_filename: str,
values: str,
tmpdir: str = "/tmp") -> str:
"""Given VALUES, and TMPDIR, generate a valide traits file"""
trait_filename += f"_{generate_random_n_string(6)}"
with open(f"{tmpdir}/gn2/{trait_filename}", "w") as _file:
for value in values:
if value == "x":
_file.write("NA\n")
else:
_file.write(f"{value}\n")
return f"{tmpdir}/gn2/{trait_filename}"
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