blob: c4955a0b7990b77725e4005560d0aaef04c3bedd (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
|
"""module contains code to process ctl analysis data"""
from gn3.commands import run_cmd
from gn3.computations.wgcna import dump_wgcna_data
from gn3.computations.wgcna import compose_wgcna_cmd
def call_ctl_script(data):
"""function to call ctl script"""
temp_file_name = dump_wgcna_data(data)
cmd = compose_wgcna_cmd("ctl_analysis.R", temp_file_name)
try:
cmd_results = run_cmd(cmd)
print(cmd_results)
except Exception as e:
raise e
return "hello"
|