From a1a376db4848a3ccd74c9c384efacea4579ce165 Mon Sep 17 00:00:00 2001
From: zsloan
Date: Fri, 17 Mar 2023 18:27:42 +0000
Subject: Add conn.commit() to queries in sample_data.py

---
 gn3/db/sample_data.py | 8 ++++++++
 1 file changed, 8 insertions(+)

(limited to 'gn3')

diff --git a/gn3/db/sample_data.py b/gn3/db/sample_data.py
index 96168f1..4d8a14f 100644
--- a/gn3/db/sample_data.py
+++ b/gn3/db/sample_data.py
@@ -158,6 +158,7 @@ def update_sample_data(
                     (f"UPDATE {table} SET {_val} = %s " f"WHERE {sub_query}"),
                     (value, strain_id, data_id),
                 )
+                conn.commit()
                 return cursor.rowcount
         return 0
 
@@ -185,6 +186,7 @@ def update_sample_data(
                         "AND InbredSetId = %s",
                         (value, strain_id, name, inbredset_id),
                     )
+                conn.commit()
                 return cursor.rowcount
         return 0
 
@@ -264,6 +266,7 @@ def delete_sample_data(
                 (f"DELETE FROM {table} " f"WHERE {sub_query}"),
                 (strain_id, data_id),
             )
+            conn.commit()
             return cursor.rowcount
 
     def __delete_case_attribute(conn, strain_id, case_attr, inbredset_id):
@@ -285,6 +288,7 @@ def delete_sample_data(
                     "AND InbredSetId = %s",
                     (strain_id, name, inbredset_id),
                 )
+            conn.commit()
             return cursor.rowcount
 
     strain_id, data_id, inbredset_id = get_sample_data_ids(
@@ -337,6 +341,7 @@ def insert_sample_data(
                     ),
                     (strain_id, data_id, value),
                 )
+                conn.commit()
                 return cursor.rowcount
         return 0
 
@@ -367,7 +372,9 @@ def insert_sample_data(
                         (strain_id, id_, value, inbredset_id),
                     )
                     row_count = cursor.rowcount
+                    conn.commit()
                     return row_count
+                conn.commit()
         return 0
 
     strain_id, data_id, inbredset_id = get_sample_data_ids(
@@ -394,6 +401,7 @@ def insert_sample_data(
                 "AND StrainId = %s",
                 (data_id, strain_id),
             )
+            conn.commit()
         if cursor.fetchone():  # Data already exists
             return count
 
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