From 6630f9fca98826872a62651c89f95eecb7c8a898 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Thu, 23 Mar 2023 17:55:29 +0300
Subject: auth: list the species in the database.

---
 gn3/auth/authorisation/data/views.py | 9 +++++++++
 1 file changed, 9 insertions(+)

(limited to 'gn3/auth')

diff --git a/gn3/auth/authorisation/data/views.py b/gn3/auth/authorisation/data/views.py
index 47c3fe8..b1550d7 100644
--- a/gn3/auth/authorisation/data/views.py
+++ b/gn3/auth/authorisation/data/views.py
@@ -9,6 +9,7 @@ from functools import reduce
 from typing import Sequence, Iterable
 
 import redis
+from MySQLdb.cursors import DictCursor
 from email_validator import validate_email, EmailNotValidError
 from authlib.integrations.flask_oauth2.errors import _HTTPException
 from flask import request, jsonify, Response, Blueprint, current_app as app
@@ -40,6 +41,14 @@ from gn3.auth.authentication.users import User, user_by_email, set_user_password
 
 data = Blueprint("data", __name__)
 
+@data.route("species")
+def list_species() -> Response:
+    """List all available species information."""
+    with (gn3db.database_connection() as gn3conn,
+          gn3conn.cursor(DictCursor) as cursor):
+        cursor.execute("SELECT * FROM Species")
+        return jsonify(tuple(dict(row) for row in cursor.fetchall()))
+
 @data.route("/authorisation", methods=["GET"])
 def authorisation() -> Response:
     """Retrive the authorisation level for datasets/traits for the user."""
-- 
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