Age | Commit message (Expand) | Author |
2021-07-26 | Fix issues caught by pylint | Muriithi Frederick Muriuki |
2021-07-23 | Add data examples for `slink`. Implement function. | Muriithi Frederick Muriuki |
2021-07-23 | Add more test data | Muriithi Frederick Muriuki |
2021-07-23 | Fix issue caught in `nearest` while testing `slink` | Muriithi Frederick Muriuki |
2021-07-23 | New function (`slink`): return [] on exception | Muriithi Frederick Muriuki |
2021-07-22 | Get shortest distance from two lists/tuples of member coordinates | Muriithi Frederick Muriuki |
2021-07-22 | Test for shortest distance between members in a list and coordinate | Muriithi Frederick Muriuki |
2021-07-22 | Check that given list and both coordinates, we get shortest distance | Muriithi Frederick Muriuki |
2021-07-22 | Check that all distances are positive or zero | Muriithi Frederick Muriuki |
2021-07-22 | Check that distance from A to B is same as from B to A | Muriithi Frederick Muriuki |
2021-07-22 | Check that child distance from itself is zero | Muriithi Frederick Muriuki |
2021-07-21 | Extract tests from code in GN1 | Muriithi Frederick Muriuki |
2021-07-20 | Add test for code to move over from GN1 | Muriithi Frederick Muriuki |
2021-07-10 | Fix pylint issues | BonfaceKilz |
2021-07-10 | db: test_db: Test that a fetch is correct when columns are specified | BonfaceKilz |
2021-06-29 | tests: test_commands: Add extra check for when an error occurs | BonfaceKilz |
2021-06-29 | Add a diffing function | BonfaceKilz |
2021-06-29 | tests: test_data: Add test data that contains trait data for 10007 | BonfaceKilz |
2021-06-20 | merge main | Alexander Kabui |
2021-06-20 | make requested changes to biweight | Alexander Kabui |
2021-06-18 | Fixed another error where test_generate_rqtl_command didn't include the filen... | zsloan |
2021-06-18 | Fixed file type from json to csv for test_generate_rqtl_command | zsloan |
2021-06-18 | Fixed test_rqtl.py to include Rscript in the command | zsloan |
2021-06-18 | Fixed test_compose_rqtl_command test; forgot to include Rscript in the command | zsloan |
2021-06-18 | Change test_compose_rqtl_command in test_commands.py to have different argume... | zsloan |
2021-06-18 | minor fixes | Alexander Kabui |
2021-06-18 | remove ununsed variables | Alexander Kabui |
2021-06-18 | refactor perf query functions | Alexander Kabui |
2021-06-18 | rename perf query file | Alexander Kabui |
2021-06-18 | pep8 formatting | Alexander Kabui |
2021-06-18 | add types and dataset names | Alexander Kabui |
2021-06-18 | initial commit for queries perfomance tests | Alexander Kabui |
2021-06-18 | db: test_db: Add extra variable in test data for "id" | BonfaceKilz |
2021-06-18 | Rename json_data column to json_diff_data | BonfaceKilz |
2021-06-18 | tests: test_db: Add a test-case for fetchall | BonfaceKilz |
2021-06-18 | tests: test_db: Rename TestPhenotype | BonfaceKilz |
2021-06-18 | tests: test_phenotype: Rename to test_db | BonfaceKilz |
2021-06-18 | Use prepared statements for FETCH sql function | BonfaceKilz |
2021-06-18 | Use prepared statements for UPDATE sql function | BonfaceKilz |
2021-06-18 | tests: test_audit: Update test case to check for prepared statements | BonfaceKilz |
2021-06-18 | Add data structures for the table metadata_audit | BonfaceKilz |
2021-06-18 | unit: test_phenotypes: Test for multiple "WHERE" clauses | BonfaceKilz |
2021-06-18 | Get the diff between 2 dicts and return that as a dict | BonfaceKilz |
2021-06-18 | fix index error (#16) | Alexander Kabui |
2021-06-18 | Move the methods, "update" and "fetch", to gn3.db | BonfaceKilz |
2021-06-18 | tests: test_phenotype: Add function that tests "fetchone" | BonfaceKilz |
2021-06-18 | db: phenotypes: Update failing tests | BonfaceKilz |
2021-06-18 | tests: test_phenotypes: New test cases for loading phenotypes | BonfaceKilz |
2021-06-14 | add biweight r script and tests | Alexander Kabui |
2021-06-11 | minor fixes | Alexander Kabui |