Age | Commit message (Expand) | Author |
---|---|---|
2021-09-27 | add tests for calling wgcna_script | Alexander Kabui |
2021-09-27 | fix merge conflicts | Alexander Kabui |
2021-09-27 | Update terminology: `riset` to `group` | Frederick Muriuki Muriithi |
2021-09-27 | Update terminology: `strain` to `sample` | Frederick Muriuki Muriithi |
2021-09-25 | minor fixes for unittests | Alexander Kabui |
2021-09-23 | Refactor: Move common sample data to separate file | Frederick Muriuki Muriithi |
2021-09-22 | Fix more pylint errors | Frederick Muriuki Muriithi |
2021-09-22 | add init tests for call to script | Alexander Kabui |
2021-09-17 | Fix a number of linting issues | Frederick Muriuki Muriithi |
2021-09-16 | pylint fixes | Alexander Kabui |
2021-09-16 | init tests for wgcna | Alexander Kabui |
2021-09-15 | initial test file for wgcna | Alexander Kabui |
2021-09-15 | Process data into format usable by heatmaps | Frederick Muriuki Muriithi |
2021-09-15 | Integrate get_lsr_from_chr function | Frederick Muriuki Muriithi |
2021-09-15 | Reorganise modules | Frederick Muriuki Muriithi |
2021-09-15 | Fix format of arguments and expected values | Frederick Muriuki Muriithi |
2021-09-15 | Add missing sample file for tests | Frederick Muriuki Muriithi |
2021-09-08 | Ease search for traits and chromosomes | Muriithi Frederick Muriuki |
2021-09-08 | Fix the traits order computations for clustering | Muriithi Frederick Muriuki |
2021-09-06 | Provide function to organise parsed QTLReaper results | Muriithi Frederick Muriuki |
2021-09-06 | Leave "Chr" value as string when parsing | Muriithi Frederick Muriuki |
2021-09-01 | Fix linting and typing issues | Muriithi Frederick Muriuki |
2021-09-01 | Built top-level genotype file parsing function | Muriithi Frederick Muriuki |
2021-09-01 | Parse data lines into markers | Muriithi Frederick Muriuki |
2021-09-01 | Parse the genotype file's data header | Muriithi Frederick Muriuki |
2021-09-01 | Implement parsing of genotype labels | Muriithi Frederick Muriuki |
2021-08-31 | Fix linting errors, minor bugs and reorganise code | Muriithi Frederick Muriuki |
2021-08-31 | Fix test | Muriithi Frederick Muriuki |
2021-08-31 | Parse QTLReaper outputs | Muriithi Frederick Muriuki |
2021-08-20 | Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_gener... | Muriithi Frederick Muriuki |
2021-08-20 | Retrieve the strains with valid values | Muriithi Frederick Muriuki |
2021-08-20 | Add tests for ordering and implement function | Muriithi Frederick Muriuki |
2021-08-20 | Minor correlation fixes (#36) | Alexander Kabui |
2021-08-18 | Test the clustering | Muriithi Frederick Muriuki |
2021-08-18 | Add tests and fix errors caught with tests | Muriithi Frederick Muriuki |
2021-08-17 | Test the clustering | Muriithi Frederick Muriuki |
2021-08-17 | Add tests and fix errors caught with tests | Muriithi Frederick Muriuki |
2021-08-16 | Merge pull request #32 from genenetwork/heatmap_decompose_db_retrieval | BonfaceKilz |
2021-08-11 | use normal function for correlation (#34) | Alexander Kabui |
2021-08-09 | Set up the trait dataset type correctly | Muriithi Frederick Muriuki |
2021-08-09 | Fix linting errors | Muriithi Frederick Muriuki |
2021-08-08 | Update tests | Muriithi Frederick Muriuki |
2021-08-05 | Reorganise the database code | Muriithi Frederick Muriuki |
2021-08-05 | Build up trait_name items from full name | Muriithi Frederick Muriuki |
2021-08-04 | Fix issues caught by pylint | Muriithi Frederick Muriuki |
2021-08-04 | Retrieve the RISet and RISet ID values | Muriithi Frederick Muriuki |
2021-08-04 | Add tests for post-processing functions | Muriithi Frederick Muriuki |
2021-08-04 | Update tests | Muriithi Frederick Muriuki |
2021-07-30 | Remove extra space | Muriithi Frederick Muriuki |
2021-07-30 | Return dict from query functions | Muriithi Frederick Muriuki |