Age | Commit message (Expand) | Author |
2021-10-19 | Disable pylint issue | Frederick Muriuki Muriithi |
2021-10-19 | Move `export_informative` function to `gn3.db.traits` module | Frederick Muriuki Muriithi |
2021-10-19 | Move 'export_trait_data' to 'gn3.db.traits' module | Frederick Muriuki Muriithi |
2021-09-27 | Update terminology: `riset` to `group` | Frederick Muriuki Muriithi |
2021-09-23 | Refactor: Move common sample data to separate file | Frederick Muriuki Muriithi |
2021-09-22 | Fix more pylint errors | Frederick Muriuki Muriithi |
2021-09-15 | Add missing sample file for tests | Frederick Muriuki Muriithi |
2021-09-01 | Fix linting and typing issues | Muriithi Frederick Muriuki |
2021-09-01 | Built top-level genotype file parsing function | Muriithi Frederick Muriuki |
2021-09-01 | Parse data lines into markers | Muriithi Frederick Muriuki |
2021-09-01 | Parse the genotype file's data header | Muriithi Frederick Muriuki |
2021-09-01 | Implement parsing of genotype labels | Muriithi Frederick Muriuki |
2021-08-09 | Set up the trait dataset type correctly | Muriithi Frederick Muriuki |
2021-08-09 | Fix linting errors | Muriithi Frederick Muriuki |
2021-08-08 | Update tests | Muriithi Frederick Muriuki |
2021-08-05 | Reorganise the database code | Muriithi Frederick Muriuki |
2021-08-05 | Build up trait_name items from full name | Muriithi Frederick Muriuki |
2021-08-04 | Fix issues caught by pylint | Muriithi Frederick Muriuki |
2021-08-04 | Retrieve the RISet and RISet ID values | Muriithi Frederick Muriuki |
2021-08-04 | Add tests for post-processing functions | Muriithi Frederick Muriuki |
2021-08-04 | Update tests | Muriithi Frederick Muriuki |
2021-07-30 | Remove extra space | Muriithi Frederick Muriuki |
2021-07-30 | Return dict from query functions | Muriithi Frederick Muriuki |
2021-07-29 | Merge branch 'main' into Feature/Update-db-from-csv-data | BonfaceKilz |
2021-07-29 | Delete "update_raw" and it's test-cases | BonfaceKilz |
2021-07-29 | Add method for updating values from a sample dataset | BonfaceKilz |
2021-07-29 | Retrieve trait information | Muriithi Frederick Muriuki |
2021-07-29 | Make name retrieval more general | Muriithi Frederick Muriuki |
2021-07-29 | Retrieve 'ProbeSet' trait name | Muriithi Frederick Muriuki |
2021-07-26 | tests: test_db: Add test case for "update_raw" | BonfaceKilz |
2021-07-10 | Fix pylint issues | BonfaceKilz |
2021-07-10 | db: test_db: Test that a fetch is correct when columns are specified | BonfaceKilz |
2021-06-07 | db: test_db: Add extra variable in test data for "id" | BonfaceKilz |
2021-06-07 | Rename json_data column to json_diff_data | BonfaceKilz |
2021-06-07 | tests: test_db: Add a test-case for fetchall | BonfaceKilz |
2021-06-07 | tests: test_db: Rename TestPhenotype | BonfaceKilz |
2021-06-07 | tests: test_phenotype: Rename to test_db | BonfaceKilz |
2021-06-03 | Use prepared statements for FETCH sql function | BonfaceKilz |
2021-06-03 | Use prepared statements for UPDATE sql function | BonfaceKilz |
2021-06-03 | tests: test_audit: Update test case to check for prepared statements | BonfaceKilz |
2021-06-03 | Add data structures for the table metadata_audit | BonfaceKilz |
2021-06-03 | unit: test_phenotypes: Test for multiple "WHERE" clauses | BonfaceKilz |
2021-06-03 | Get the diff between 2 dicts and return that as a dict | BonfaceKilz |
2021-05-26 | Move the methods, "update" and "fetch", to gn3.db | BonfaceKilz |
2021-05-20 | tests: test_phenotype: Add function that tests "fetchone" | BonfaceKilz |
2021-05-20 | db: phenotypes: Update failing tests | BonfaceKilz |
2021-05-20 | tests: test_phenotypes: New test cases for loading phenotypes | BonfaceKilz |
2021-05-10 | tests: test_species: Add test for `get_all_species` | BonfaceKilz |
2021-05-08 | tests: test_species: New tests | BonfaceKilz |