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AgeCommit message (Expand)Author
2022-03-22fix for wgcna testsAlexander Kabui
2022-03-22rename compose_wgcna to general func nameAlexander Kabui
2022-03-15Feature/refactored pca (#79)Alexander Kabui
2022-03-08Remove unused function and its testsFrederick Muriuki Muriithi
2022-02-24gn3: Explicitly specify UTF-8 to be the file encoding.Arun Isaac
2022-02-21Fix a myriad of linter issuesFrederick Muriuki Muriithi
2022-02-17Use pytest's "mark" feature to categorise testsFrederick Muriuki Muriithi
2022-02-17Add property tests for `dictify_by_samples`Frederick Muriuki Muriithi
2021-12-14linting: Fix obvious linting issuesFrederick Muriuki Muriithi
2021-12-10refactor sample r unittestsAlexander Kabui
2021-12-10refactor unittest for normalizing sample valuesAlexander Kabui
2021-11-29Update test for data changesFrederick Muriuki Muriithi
2021-11-19Avoid rounding: compare floats approximatelyFrederick Muriuki Muriithi
2021-11-18Fix some linting errorsFrederick Muriuki Muriithi
2021-11-18Replace code migrated from R with pingouin functionsFrederick Muriuki Muriithi
2021-11-15Fix bugs in recursive partial correlationsFrederick Muriuki Muriithi
2021-11-15Fix the columns in built data frameFrederick Muriuki Muriithi
2021-11-12Merge branch 'main' of github.com:genenetwork/genenetwork3 into partial-corre...Frederick Muriuki Muriithi
2021-11-12Pass in parser function for flexibilityFrederick Muriuki Muriithi
2021-11-11Reimplement correlations2.compute_correlation using pearsonr.Arun Isaac
2021-11-11Compare floats approximately.Arun Isaac
2021-11-11pep8 formatting;update unittestsAlexander Kabui
2021-11-09Merge branch 'main' of github.com:genenetwork/genenetwork3 into partial-corre...Frederick Muriuki Muriithi
2021-11-09Implement remaining part of `partial_correlation_recursive` functionFrederick Muriuki Muriithi
2021-11-09Update test data: have both vectors and matricesFrederick Muriuki Muriithi
2021-11-04test_partial_correlations: skip failing testsBonfaceKilz
2021-11-04Create blackbox tests for some functions migrated from RFrederick Muriuki Muriithi
2021-11-04Retrieve indices of the selected samplesFrederick Muriuki Muriithi
2021-11-04Specify ten (10) decimal placesFrederick Muriuki Muriithi
2021-11-04Fix some linting errorsFrederick Muriuki Muriithi
2021-11-04Implement `tissue_correlation` functionFrederick Muriuki Muriithi
2021-11-04Partially implement `partial_correlation_recursive`Frederick Muriuki Muriithi
2021-11-04Implement `build_data_frame`Frederick Muriuki Muriithi
2021-11-04Create blackbox tests for some functions migrated from RFrederick Muriuki Muriithi
2021-11-01Merge branch 'main' of github.com:genenetwork/genenetwork3 into partial-corre...Frederick Muriuki Muriithi
2021-11-01Retrieve indices of the selected samplesFrederick Muriuki Muriithi
2021-10-29Feature/biweight reimplementation (#47)Alexander Kabui
2021-10-29Specify ten (10) decimal placesFrederick Muriuki Muriithi
2021-10-29Fix some linting errorsFrederick Muriuki Muriithi
2021-10-29Implement `tissue_correlation` functionFrederick Muriuki Muriithi
2021-10-25fix unittestsAlexander Kabui
2021-09-27modify unittestsAlexander Kabui
2021-09-27add tests for calling wgcna_scriptAlexander Kabui
2021-09-27fix merge conflictsAlexander Kabui
2021-09-27Update terminology: `strain` to `sample`Frederick Muriuki Muriithi
2021-09-25minor fixes for unittestsAlexander Kabui
2021-09-23Refactor: Move common sample data to separate fileFrederick Muriuki Muriithi
2021-09-22add init tests for call to scriptAlexander Kabui
2021-09-17Fix a number of linting issuesFrederick Muriuki Muriithi
2021-09-16pylint fixesAlexander Kabui
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