genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2021-10-29	Implement `tissue_correlation` function	Frederick Muriuki Muriithi
2021-10-25	fix unittests	Alexander Kabui
2021-09-27	modify unittests	Alexander Kabui
2021-09-27	add tests for calling wgcna_script	Alexander Kabui
2021-09-27	fix merge conflicts	Alexander Kabui
2021-09-27	Update terminology: `strain` to `sample`	Frederick Muriuki Muriithi
2021-09-25	minor fixes for unittests	Alexander Kabui
2021-09-23	Refactor: Move common sample data to separate file	Frederick Muriuki Muriithi
2021-09-22	add init tests for call to script	Alexander Kabui
2021-09-17	Fix a number of linting issues	Frederick Muriuki Muriithi
2021-09-16	pylint fixes	Alexander Kabui
2021-09-16	init tests for wgcna	Alexander Kabui
2021-09-15	initial test file for wgcna	Alexander Kabui
2021-09-15	Reorganise modules	Frederick Muriuki Muriithi
2021-09-15	Fix format of arguments and expected values	Frederick Muriuki Muriithi
2021-09-08	Ease search for traits and chromosomes	Muriithi Frederick Muriuki
2021-09-08	Fix the traits order computations for clustering	Muriithi Frederick Muriuki
2021-09-06	Provide function to organise parsed QTLReaper results	Muriithi Frederick Muriuki
2021-09-06	Leave "Chr" value as string when parsing	Muriithi Frederick Muriuki
2021-08-31	Fix linting errors, minor bugs and reorganise code	Muriithi Frederick Muriuki
2021-08-31	Fix test	Muriithi Frederick Muriuki
2021-08-31	Parse QTLReaper outputs	Muriithi Frederick Muriuki
2021-08-20	Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_gener...	Muriithi Frederick Muriuki
2021-08-20	Retrieve the strains with valid values	Muriithi Frederick Muriuki
2021-08-20	Add tests for ordering and implement function	Muriithi Frederick Muriuki
2021-08-20	Minor correlation fixes (#36)	Alexander Kabui
2021-08-18	Test the clustering	Muriithi Frederick Muriuki
2021-08-18	Add tests and fix errors caught with tests	Muriithi Frederick Muriuki
2021-08-17	Test the clustering	Muriithi Frederick Muriuki
2021-08-17	Add tests and fix errors caught with tests	Muriithi Frederick Muriuki
2021-08-11	use normal function for correlation (#34)	Alexander Kabui
2021-07-26	Fix issues caught by pylint	Muriithi Frederick Muriuki
2021-07-23	Add data examples for `slink`. Implement function.	Muriithi Frederick Muriuki
2021-07-23	Add more test data	Muriithi Frederick Muriuki
2021-07-23	Fix issue caught in `nearest` while testing `slink`	Muriithi Frederick Muriuki
2021-07-23	New function (`slink`): return [] on exception	Muriithi Frederick Muriuki
2021-07-22	Get shortest distance from two lists/tuples of member coordinates	Muriithi Frederick Muriuki
2021-07-22	Test for shortest distance between members in a list and coordinate	Muriithi Frederick Muriuki
2021-07-22	Check that given list and both coordinates, we get shortest distance	Muriithi Frederick Muriuki
2021-07-22	Check that all distances are positive or zero	Muriithi Frederick Muriuki
2021-07-22	Check that distance from A to B is same as from B to A	Muriithi Frederick Muriuki
2021-07-22	Check that child distance from itself is zero	Muriithi Frederick Muriuki
2021-07-21	Extract tests from code in GN1	Muriithi Frederick Muriuki
2021-07-20	Add test for code to move over from GN1	Muriithi Frederick Muriuki
2021-06-29	Add a diffing function	BonfaceKilz
2021-06-20	merge main	Alexander Kabui
2021-06-20	make requested changes to biweight	Alexander Kabui
2021-06-18	Fixed another error where test_generate_rqtl_command didn't include the filen...	zsloan
2021-06-18	Fixed file type from json to csv for test_generate_rqtl_command	zsloan
2021-06-18	Fixed test_rqtl.py to include Rscript in the command	zsloan