genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2021-07-22	Check that child distance from itself is zero•••Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * gn3/computations/slink.py: Check that a child's distance from itself is zero. If not, throw an exception. The children lists are a list of distances of "something" from other "somethings". There is still some need to establish what those "somethings" are, so that the test names can reflect the ideas that are actually being tested for. * tests/unit/computations/test_slink.py: Change the name of the test so that it more closely corresponds to the business logic it is actually testing, and not the mechanics of testing the idea.	Muriithi Frederick Muriuki
2021-07-21	Extract tests from code in GN1•••Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * gn3/computations/slink.py: Add dummy `nearest' function * tests/unit/computations/test_slink.py: Add some tests This commit adds tests to try and reproduce the working of the `nearest' function in: https://github.com/genenetwork/genenetwork1/blob/master/web/webqtl/heatmap/slink.py This commit might not yet have extracted all the expected behaviour of the `nearest' function, and therefore, there is a possibility of a later commit augmenting the work in this commit.	Muriithi Frederick Muriuki