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path: root/tests/unit/computations/test_qtlreaper.py
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2021-08-31Fix linting errors, minor bugs and reorganise code•••* Fix some linting errors and some minor bugs caught by the linter. Move the `random_string` function to separate module for use in multiple places in the code. Muriithi Frederick Muriuki
2021-08-31Parse QTLReaper outputs•••Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * gn3/computations/qtlreaper.py: pass output files * tests/unit/computations/data/qtlreaper/main_output_sample.txt: sample test data * tests/unit/computations/data/qtlreaper/permu_output_sample.txt: sample test data * tests/unit/computations/test_qtlreaper.py: add tests Add code to parse the QTLReaper output data files. Muriithi Frederick Muriuki