aboutsummaryrefslogtreecommitdiff
path: root/tests/integration/conftest.py
AgeCommit message (Expand)Author
2022-02-21Test partial corrs API with mix of existing and non-existing control traits...Test that the partial correlations endpoint handles a mix of existing and non-existing control traits gracefully and issues a warning to the user. Summary of changes: * gn3/computations/partial_correlations.py: Issue a warning for all non-existing control traits * gn3/db/partial_correlations.py: update queries - use `INNER JOIN` for tables instead of comma-separated list of tables * tests/integration/conftest.py: Add `db_conn` fixture to provide a database connection to the tests. This will probably be changed in the future to connect to a temporary database for tests. * tests/integration/test_partial_correlations.py: Add test to check for correct behaviour with a mix of existing and non-existing control traits Frederick Muriuki Muriithi
2022-02-17Create client fixture for integration tests...Create a client fixture to help with the integration tests Frederick Muriuki Muriithi