Age | Commit message (Collapse) | Author | |
---|---|---|---|
2021-09-23 | Updated rqtl_wrapper to also return a map file when doing a pair-scan (since ↵ | zsloan | |
we need the list of markers/pseudomarkers and their positions) | |||
2021-09-23 | Added line priting pair-scan results to CSV and changed the default ↵ | zsloan | |
step-size to 10cM for pair-scan | |||
2021-09-23 | - Added scan_func function that determines whether scanone or scantwo | zsloan | |
(pairscan) is used - For pairscan default to using step 20 (subject to change, but some step is required during calc.genoprob to make it run fast enough) - Added some new verbose prints | |||
2021-09-23 | Added option for running pairscan to rqtl_wrapper.R | zsloan | |
2021-08-28 | Fix issue that caused R/qtl to not use the first covariate when using ↵ | zsloan | |
stratified permutations + covariates | |||
2021-08-26 | Added # permutations to verbose print | zsloan | |
2021-06-23 | minor fixes for biweight script | Alexander Kabui | |
2021-06-22 | scripts: laminar: Add json with hooks for running a linter | BonfaceKilz | |
2021-06-22 | scripts: laminar: Add sh scripts for CI | BonfaceKilz | |
2021-06-20 | merge main | Alexander Kabui | |
2021-06-20 | make requested changes to biweight | Alexander Kabui | |
2021-06-18 | Added option for enabling permutation strata | zsloan | |
Fixed issue where covariates with numerical names were being ignored Fixed issue where the hash filename wasn't being used for the permutation output | |||
2021-06-18 | Add rqtl_wrapper.R script and necessary imports to guix.scm | zsloan | |