index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2023-06-02
auth: Increase limit to 100K records
Frederick Muriuki Muriithi
2023-06-02
auth: Add delay between DB inserts
Frederick Muriuki Muriithi
2023-06-02
Auth: Bug: Display all admins before taking choice
Frederick Muriuki Muriithi
2023-05-31
scripts: Write table checksums into index.
Arun Isaac
2023-05-31
scripts: Introduce SQLTableClause.
Arun Isaac
2023-05-31
scripts: Fold long lines.
Arun Isaac
2023-05-31
scripts: Ensure only one indexing job may run at a time.
Arun Isaac
2023-05-30
Fix linting errors and failing tests
Frederick Muriuki Muriithi
2023-05-30
Enable registering sys-admin on CLI
Frederick Muriuki Muriithi
2023-05-26
Document CLI Utility Commands
Frederick Muriuki Muriithi
2023-05-25
Add some error checks.
Frederick Muriuki Muriithi
2023-05-25
Script to assign existing data to publicly-visible resources
Frederick Muriuki Muriithi
2023-05-22
Make directory at "path" and all intermediate ones.
Frederick Muriuki Muriithi
2023-04-19
oauth2: Link the phenotype traits to user groups.
Frederick Muriuki Muriithi
2023-04-19
Fix minor linting and typing issues
Frederick Muriuki Muriithi
2023-04-19
auth: Setup selected traits correctly
Frederick Muriuki Muriithi
2023-04-18
auth: Consistently JSON encode values.
Frederick Muriuki Muriithi
2023-04-17
Hook up code to use external search script for phenotypes
Frederick Muriuki Muriithi
2023-04-14
auth: Add external script to search for phenotypes
Frederick Muriuki Muriithi
2023-04-06
Remove deprecated `gn3.db_utils.database_connector` function
Frederick Muriuki Muriithi
2023-04-05
Enable use of `database_connection` in scripts without current_app
Frederick Muriuki Muriithi
2023-02-13
scripts: Fallback to 1 worker when indexing.
Arun Isaac
2023-02-13
scripts: Type hint xapian indexing script.
Arun Isaac
2022-10-18
Add xapian indexing script.
Arun Isaac
2022-07-29
New script to run sample correlations
Frederick Muriuki Muriithi
2022-06-28
Parse the method from UI before passing it to external process
Frederick Muriuki Muriithi
2022-06-20
Restrict partial correlation method choices
Frederick Muriuki Muriithi
2022-05-24
Run partial correlations with external script
Frederick Muriuki Muriithi
2022-05-24
New script to compute partial correlations
Frederick Muriuki Muriithi
2022-05-05
Extract common error checking. Rename function.
Frederick Muriuki Muriithi
2022-03-22
Merge branch 'feature/add_rqtl_pairscan' of https://github.com/zsloan/genenet...
zsloan
2022-03-22
Change order of if statements for running genoprob command
zsloan
2022-03-22
Updated rqtl_wrapper to also return a map file when doing a pair-scan (since ...
zsloan
2022-03-22
Added line priting pair-scan results to CSV and changed the default step-size...
zsloan
2022-03-22
- Added scan_func function that determines whether scanone or scantwo
zsloan
2022-03-22
Added option for running pairscan to rqtl_wrapper.R
zsloan
2022-03-08
Create database connections within context managers
Frederick Muriuki Muriithi
2022-03-03
Run partial correlations in an external process
Frederick Muriuki Muriithi
2022-02-11
Quote shell variables to prevent globbing
Frederick Muriuki Muriithi
2022-02-02
Fix R/qtl covar bug
zsloan
2022-02-02
remove comments
Alexander Kabui
2022-02-02
match case string input to boolean
Alexander Kabui
2022-02-02
fix for parametric input
Alexander Kabui
2022-02-02
use user input significance
Alexander Kabui
2022-02-02
new line fix
Alexander Kabui
2022-02-02
add new json output
Alexander Kabui
2022-01-22
minor refactoring
Alexander Kabui
2022-01-22
function override:fix target specific output file for network
Alexander Kabui
2022-01-22
generate network
Alexander Kabui
2022-01-22
generate ctl plots for each trait
Alexander Kabui
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