genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2021-10-25	script modification : add debug statements	Alexander Kabui
2021-10-14	Fixed when model is set to account for situations with no covariates	zsloan
2021-10-14	Incorporated Danny's code for calculating QTL main effects into rqtl_wrapper.R	zsloan
2021-10-12	Merge branch 'main' of https://github.com/genenetwork/genenetwork3 into bug/f...	zsloan
2021-10-12	Merge branch 'main' of https://github.com/genenetwork/genenetwork3 into featu...	zsloan
2021-09-27	remove unnecessary comments and variables	Alexander Kabui
2021-09-23	Updated rqtl_wrapper to also return a map file when doing a pair-scan (since ...	zsloan
2021-09-23	Added line priting pair-scan results to CSV and changed the default step-size...	zsloan
2021-09-23	- Added scan_func function that determines whether scanone or scantwo	zsloan
2021-09-23	Added option for running pairscan to rqtl_wrapper.R	zsloan
2021-09-23	Fix covariates as described by Danny	zsloan
2021-09-23	add traits as columns names and pass as json input	Alexander Kabui
2021-09-23	check for na powerEst and use a default value	Alexander Kabui
2021-09-23	append input to output	Alexander Kabui
2021-09-23	sample output data	Alexander Kabui
2021-09-23	validate required output	Alexander Kabui
2021-09-23	add mock test data for script	Alexander Kabui
2021-09-23	pass json file path as an arg	Alexander Kabui
2021-09-23	pass other variables from user input for network constr	Alexander Kabui
2021-09-23	load data from json file and and convert to dt	Alexander Kabui
2021-09-15	minor fixes	Alexander Kabui
2021-09-15	rename variables && delete debugs	Alexander Kabui
2021-09-15	Fetch IMAGE_DIR env and add img location	Alexander Kabui
2021-09-14	remove debug statements	Alexander Kabui
2021-09-14	function to generate rand str for image	Alexander Kabui
2021-09-14	plot plotDendroAndColors and generate png	Alexander Kabui
2021-09-14	construct gene co-expression network & module detection	Alexander Kabui
2021-09-14	compute the softthreshhold	Alexander Kabui
2021-09-14	Checking data for excessive missing values	Alexander Kabui
2021-09-14	load the required data for analysis	Alexander Kabui
2021-09-14	init commit for wgcna script	Alexander Kabui
2021-08-28	Fix issue that caused R/qtl to not use the first covariate when using stratif...	zsloan
2021-08-26	Added # permutations to verbose print	zsloan
2021-06-23	minor fixes for biweight script	Alexander Kabui
2021-06-22	scripts: laminar: Add json with hooks for running a linter	BonfaceKilz
2021-06-22	scripts: laminar: Add sh scripts for CI	BonfaceKilz
2021-06-20	merge main	Alexander Kabui
2021-06-20	make requested changes to biweight	Alexander Kabui
2021-06-18	Added option for enabling permutation strata	zsloan
2021-06-18	Add rqtl_wrapper.R script and necessary imports to guix.scm	zsloan