genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2022-03-22	Added line priting pair-scan results to CSV and changed the default step-size...	zsloan
2022-03-22	- Added scan_func function that determines whether scanone or scantwo...(pairscan) is used - For pairscan default to using step 20 (subject to change, but some step is required during calc.genoprob to make it run fast enough) - Added some new verbose prints	zsloan
2022-03-22	Added option for running pairscan to rqtl_wrapper.R	zsloan
2022-02-02	Fix R/qtl covar bug...The rqtl_wrapper script was throwing an error when only a single categorical covariate was used. This is apparently because "covars[,name]" throws an error in such a situation. Using just "covars" in such a situation prevents the error. So I just added an if statement checking the number of covariates. There might be some better way to deal with this in R, but this is the best I could come up with.	zsloan
2021-10-14	Fixed when model is set to account for situations with no covariates	zsloan
2021-10-14	Incorporated Danny's code for calculating QTL main effects into rqtl_wrapper.R	zsloan
2021-09-23	Fix covariates as described by Danny	zsloan
2021-08-28	Fix issue that caused R/qtl to not use the first covariate when using stratif...	zsloan
2021-08-26	Added # permutations to verbose print	zsloan
2021-06-18	Added option for enabling permutation strata...Fixed issue where covariates with numerical names were being ignored Fixed issue where the hash filename wasn't being used for the permutation output	zsloan
2021-06-18	Add rqtl_wrapper.R script and necessary imports to guix.scm	zsloan