aboutsummaryrefslogtreecommitdiff
path: root/gn3
AgeCommit message (Expand)Author
2024-04-30Rename retrieve_dataset_metadata to retrieve_metadata.Munyoki Kilyungi
2024-04-30Remove an f-string that doesn't have any interpolated variables.Munyoki Kilyungi
2024-04-30Add command function that returns an Either monad.Munyoki Kilyungi
2024-04-29Prevent error when group isn't in parents/f1s JSON filezsloan
2024-04-15Delete unused imports.Munyoki Kilyungi
2024-04-11Include parents/f1s in default samplelist + add boolean options for themzsloan
2024-04-04Rephrase user feedback for Fahamu API in case it takes too long to respond.Alexander_Kabui
2024-03-26add sqlite-db-path configAlexander_Kabui
2024-03-26fetch pubmed file from /gn-meta/litAlexander_Kabui
2024-03-25pep8 formattingAlexander_Kabui
2024-03-25save db data on SQLITE_PATH file pathAlexander_Kabui
2024-03-25fix user_id typeAlexander_Kabui
2024-03-25enable logigng info for api <rating>Alexander_Kabui
2024-03-25match user id to type strAlexander_Kabui
2024-03-25pep8 formattingAlexander_Kabui
2024-03-25fetch tmpdir from current app connfigAlexander_Kabui
2024-03-25fix db path issue for lllmAlexander_Kabui
2024-03-25use data dir for filesAlexander_Kabui
2024-03-22use tmp for test dbAlexander_Kabui
2024-03-22dump gnqa rating data to dbAlexander_Kabui
2024-03-22add gnqa db pathAlexander_Kabui
2024-03-18delete test fileAlexander_Kabui
2024-03-18fetch pubmed data from tmpdirAlexander_Kabui
2024-03-15add pubmed metadataAlexander_Kabui
2024-03-15add error handling for invalid tokensAlexander_Kabui
2024-03-15Remove ALL html templates from GeneNetwork3Frederick Muriuki Muriithi
2024-03-04Check for exception args and provide traceback.Frederick Muriuki Muriithi
2024-03-04Handle generic exceptions gracefully.Frederick Muriuki Muriithi
2024-02-25Disable too-many-arguments for "run_reaper".Munyoki Kilyungi
2024-02-25Fix line-too-long error.Munyoki Kilyungi
2024-02-25Correctly handle URLError.Munyoki Kilyungi
2024-02-25Construct genofile_path using pathlib module.Munyoki Kilyungi
2024-02-19Pass qtlreaper command path as argument to run_reaperzsloan
2024-02-15Use correct names for dataset entries in json result.Munyoki Kilyungi
2024-02-14Delete type hints from handle_sparql_errors.Munyoki Kilyungi
2024-02-14Delete trailing space.Munyoki Kilyungi
2024-02-14Remove try ... except clauses around RDF endpoints.Munyoki Kilyungi
2024-02-14Minor pep-8 fixes.Munyoki Kilyungi
2024-02-14Handle sparql errors at the app level.Munyoki Kilyungi
2024-02-14raise error for fahamu api 0 task_idAlexander_Kabui
2024-02-14Stem the dataset's id before constructing the path.Munyoki Kilyungi
2024-02-13Use correct path for dataset metadata files.Munyoki Kilyungi
2024-02-13Fetch extra metadata from text-files when fetching datasets.Munyoki Kilyungi
2024-02-13Update "dataset/<name>" API endpoint to fetch metadata from files.Munyoki Kilyungi
2024-02-13Retrieve metadata from text files given a path.Munyoki Kilyungi
2024-02-12pep8 formattingAlexander_Kabui
2024-01-30Add the traceback to the exceptions for display.Frederick Muriuki Muriithi
2024-01-26centralize common errorsAlexander_Kabui
2024-01-26Feature/gn llm caching (#148)Alexander Kabui
2024-01-17fix error message for empty responsesAlexander_Kabui
generated by cgit v1.2.3 (git 2.44.0) at 2024-11-23 00:49:12 +0000