index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
about
summary
refs
log
tree
commit
diff
log msg
author
committer
range
path:
root
/
gn3
Age
Commit message (
Expand
)
Author
2023-10-06
Settings: Add note to discourage importing directly from defaults
Frederick Muriuki Muriithi
2023-09-21
Fix query in update_cross_reference
zsloan
2023-09-05
Delete un-used import
Munyoki Kilyungi
2023-09-05
Fix C3001: Lambda expression assigned to a variable
Munyoki Kilyungi
2023-09-05
Remove un-necessary ellipsis
Munyoki Kilyungi
2023-09-05
Remove un-necessary string concatenation
Munyoki Kilyungi
2023-09-05
Remove pylint skip
Munyoki Kilyungi
2023-09-05
Replace "escape_string" with safe-query parameters
Munyoki Kilyungi
2023-09-05
Remove type annotations for "none_case_attrs" variables
Munyoki Kilyungi
2023-08-24
Change get_pheno_csv_sample_data to use group ID instead of phenotype ID
zsloan
2023-08-18
Commit on success, rollback on error.
Frederick Muriuki Muriithi
2023-08-17
Fix query for fetching DataId when inserting ProbeSet data
zsloan
2023-08-17
Fix a couple remaining issues with function parameters
zsloan
2023-08-17
Combine pheno/mrna update functions + some other fixes
zsloan
2023-08-17
Fix queries for fetching group names
zsloan
2023-08-17
Fix fetch_trait query for phenotypes
zsloan
2023-08-17
Fix a few misnamed tables in mrna delete/insert functions
zsloan
2023-08-17
Implement ProbeSet sample data editing
zsloan
2023-08-17
Fix probeset sample data and CSV sample data functions
zsloan
2023-08-17
Fix query for retrieving mrna dataset group name
zsloan
2023-08-17
Fix get_mrna_sample_data query
zsloan
2023-08-17
Fix mrna group name query
zsloan
2023-08-17
Remove Id select from probeset metadata query, since it's included in cols
zsloan
2023-08-17
Add function for retrieving mRNA Assay group name
zsloan
2023-08-17
Make several sample_data fetching functions specific to phenotype or mrna ass...
zsloan
2023-08-04
Remove the ORM-dependent `update` function.
Frederick Muriuki Muriithi
2023-08-02
Add deprecation notice to ORM-dependent `update` function
Frederick Muriuki Muriithi
2023-08-02
Remove ORM-dependent `insert` function
Frederick Muriuki Muriithi
2023-08-02
Remove ORM-dependent `fetchall` and `fetchone` functions
Frederick Muriuki Muriithi
2023-08-02
Integrate Temp traits to Auth
Frederick Muriuki Muriithi
2023-07-31
Fix typing issue
Frederick Muriuki Muriithi
2023-07-31
Fix linting and typing issues.
Frederick Muriuki Muriithi
2023-07-31
Fix bugs. Return resource without data items.
Frederick Muriuki Muriithi
2023-07-31
Paginate the resource data items.
Frederick Muriuki Muriithi
2023-07-26
Fix variable name.
Frederick Muriuki Muriithi
2023-07-26
Remove debug statement.
Frederick Muriuki Muriithi
2023-07-26
Fetch `metadata_audit` trail with direct query functions.
Frederick Muriuki Muriithi
2023-07-26
Function to create a metadata audit trail.
Frederick Muriuki Muriithi
2023-07-21
Add some debug utilities.
Frederick Muriuki Muriithi
2023-07-21
Update a Publication in the database.
Frederick Muriuki Muriithi
2023-07-21
Fetch a publication by its PubMed ID
Frederick Muriuki Muriithi
2023-07-21
Rename function: fetch_publication ==> fetch_publication_by_id
Frederick Muriuki Muriithi
2023-07-19
Extract code dealing with ProbeSets to their own module.
Frederick Muriuki Muriithi
2023-07-19
Extract reusable code to separate module
Frederick Muriuki Muriithi
2023-07-18
Bug: Change from `_id` to `id_` to avoid downstream breakage.
Frederick Muriuki Muriithi
2023-07-18
Fix wrong import, and typing issues.
Frederick Muriuki Muriithi
2023-07-18
Fetch a single publication by `PublicationId`
Frederick Muriuki Muriithi
2023-07-18
Fetch metadata for a single phenotype.
Frederick Muriuki Muriithi
2023-07-18
Fetch single phenotype trait by `dataset_id` and `trait_name`.
Frederick Muriuki Muriithi
2023-07-18
Bug: Fetch group name by dataset_id
Frederick Muriuki Muriithi
[prev]
[next]