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genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2024-08-09
Add RIF/WIKI as search prefixes for XRF/XWK.
Munyoki Kilyungi
2024-08-01
Add logging for helping with troubleshooting.
Frederick Muriuki Muriithi
2024-08-01
Add handler for unhandled exceptions from `gn3.oauth2` module.
Frederick Muriuki Muriithi
2024-08-01
Update case-attribute editing to use new authorisation.
Frederick Muriuki Muriithi
2024-08-01
Add `gn3.oauth2` module to handle authorisations
Frederick Muriuki Muriithi
2024-08-01
Stem group field regardless of case.
Arun Isaac
2024-08-01
Stem all the time.
Arun Isaac
2024-07-08
Pass output directory to R/qtl script instead of pulling it from the
zsloan
2024-07-05
fix: return query error message from xapian
John Nduli
2024-07-03
fix: use correct prefix and index key; group wiki cache query
John Nduli
2024-07-03
feat: add wikidata prefix to search api
John Nduli
2024-06-26
Increase max number of results to 50000 for Xapian search
zsloan
2024-06-14
fix: typehints in index-genenetwork script
John Nduli
2024-06-12
refactor: add db_utils global logger that will be the default
John Nduli
2024-06-12
fix: use current_app's logger to log db errors
John Nduli
2024-06-12
fix: log errors when an exception occurs due to db_utils
John Nduli
2024-06-01
Add geneRIF prefix.
Munyoki Kilyungi
2024-05-29
Add delete functionality for gnqa history.
Alexander_Kabui
2024-05-27
Add regular expressions for parsing links in texts.
Alexander_Kabui
2024-05-27
Remove duplicate code for loading files.
Alexander_Kabui
2024-05-27
Delete filter response text method and update relevant code.
Alexander_Kabui
2024-05-27
Update Docstrings for Api endpoints and functions.
Alexander_Kabui
2024-05-24
Add created_at timestamp for Rating table.
Alexander_Kabui
2024-05-24
Add created_at timestamp to History table.
Alexander_Kabui
2024-05-24
Pylint fixes.
Alexander_Kabui
2024-05-24
Remove kwargs from LLMErrorr Exceptions and update relevant code.
Alexander_Kabui
2024-05-24
Initiliaze second args to LLMError as query parameter.
Alexander_Kabui
2024-05-24
Return first argument as error message.
Alexander_Kabui
2024-05-24
Remove Try/Excepts from llm api endponts.
Alexander_Kabui
2024-05-24
Removed status check on get_gnqa function.
Alexander_Kabui
2024-05-24
Check for null and empty data results and update timeout message
Alexander_Kabui
2024-05-24
Pass query as an argument to api_client ask method.
Alexander_Kabui
2024-05-24
Initialize new class attribute self.query for to pass to LLMError.
Alexander_Kabui
2024-05-24
Remove try/block for get_answer/ask methods:Exception already raised
Alexander_Kabui
2024-05-24
Update custom_request to raise LLMError for Exceptions.
Alexander_Kabui
2024-05-24
Remove redundant llm base class exception.
Alexander_Kabui
2024-05-23
Remove irrelevant variable assignments.
Alexander_Kabui
2024-05-23
rename gnqna route to search.
Alexander_Kabui
2024-05-23
Refactor error handling code.
Alexander_Kabui
2024-05-22
This commit does the following:
Alexander_Kabui
2024-05-22
Refactor error handling for llm api's.
Alexander_Kabui
2024-05-22
Register LLM error in app.
Alexander_Kabui
2024-05-21
Remove obsolete functions.
Alexander_Kabui
2024-05-21
Add search gnqa history functionality.
Alexander_Kabui
2024-05-20
Delete search endpoints for datasets/publications.
Munyoki Kilyungi
2024-05-20
Remove unused variable.
Munyoki Kilyungi
2024-05-17
Add endpoint for getting prev user searches
Alexander_Kabui
2024-05-17
Refactor custom request codebase.
Alexander_Kabui
2024-05-17
Timeout code refactoring.
Alexander_Kabui
2024-05-16
Refactor code for http request adapters.
Alexander_Kabui
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