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genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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2024-08-26
Fix handling of sparql errors.
Munyoki Kilyungi
2024-08-26
If there's no data, return a 404.
Munyoki Kilyungi
2024-08-26
Set correct content-header & status code for ld+json/json response.
Munyoki Kilyungi
2024-08-26
Replace map with list comprehension.
Munyoki Kilyungi
2024-08-26
Fetch all the wiki entries by symbol.
Munyoki Kilyungi
2024-08-26
Move constants to their own file.
Munyoki Kilyungi
2024-08-26
Run autopep8 against file.
Munyoki Kilyungi
2024-08-26
chore: fix pylint errors
John Nduli
2024-08-26
refactor: split out utlities into their modules and change api to use metadata
John Nduli
2024-08-26
refactor: clean up wiki edit implementation
John Nduli
2024-08-26
feat: add support for categories in edit query and clearer errors
John Nduli
2024-08-26
feat: support for edit wiki entry
John Nduli
2024-08-13
Fix pylint errors.
Munyoki Kilyungi
2024-08-09
Use correct stemming strategy when searching.
Munyoki Kilyungi
2024-08-09
Add RIF/WIKI as search prefixes for XRF/XWK.
Munyoki Kilyungi
2024-08-01
Add logging for helping with troubleshooting.
Frederick Muriuki Muriithi
2024-08-01
Add handler for unhandled exceptions from `gn3.oauth2` module.
Frederick Muriuki Muriithi
2024-08-01
Update case-attribute editing to use new authorisation.
Frederick Muriuki Muriithi
2024-08-01
Add `gn3.oauth2` module to handle authorisations
Frederick Muriuki Muriithi
2024-08-01
Stem group field regardless of case.
Arun Isaac
2024-08-01
Stem all the time.
Arun Isaac
2024-07-08
Pass output directory to R/qtl script instead of pulling it from the
zsloan
2024-07-05
fix: return query error message from xapian
John Nduli
2024-07-03
fix: use correct prefix and index key; group wiki cache query
John Nduli
2024-07-03
feat: add wikidata prefix to search api
John Nduli
2024-06-26
Increase max number of results to 50000 for Xapian search
zsloan
2024-06-14
fix: typehints in index-genenetwork script
John Nduli
2024-06-12
refactor: add db_utils global logger that will be the default
John Nduli
2024-06-12
fix: use current_app's logger to log db errors
John Nduli
2024-06-12
fix: log errors when an exception occurs due to db_utils
John Nduli
2024-06-01
Add geneRIF prefix.
Munyoki Kilyungi
2024-05-20
Delete search endpoints for datasets/publications.
Munyoki Kilyungi
2024-05-20
Remove unused variable.
Munyoki Kilyungi
2024-05-09
Improve error messaging for use of invalid fahamu token.
Alexander_Kabui
2024-05-01
pep8 formatting
Alexander_Kabui
2024-05-01
Delete debug code
Alexander_Kabui
2024-05-01
Debug: check for if config is loaded in gn3.
Alexander_Kabui
2024-05-01
Fix: fix string formatting error and remove unused imports.
Alexander_Kabui
2024-05-01
Refactoring
Alexander_Kabui
2024-05-01
Debug:fix issue use current_app to fetch config
Alexander_Kabui
2024-05-01
Debug Process for LLM_DB_PATH
Alexander_Kabui
2024-05-01
Load LLM_DB_PATH as a setting.
Alexander_Kabui
2024-05-01
Add more error info for Database Open error raised
Alexander_Kabui
2024-04-30
Add a general Exception for the /rating api
Alexander_Kabui
2024-04-30
Replace SQLITE_DB_PATH with LLM_DB_PATH for llm db path.
Alexander_Kabui
2024-04-30
Update LLM_DB_PATH config.
Alexander_Kabui
2024-04-30
Add docstring to view_history function.
Munyoki Kilyungi
2024-04-30
Use JWT tokens from gn-auth.
Munyoki Kilyungi
2024-04-30
Add an endpoint to query a dataset's git history from it's id.
Munyoki Kilyungi
2024-04-30
Add a method for saving a dataset's metadata to git.
Munyoki Kilyungi
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