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2025-04-24Add "**kwargs" to delete_wiki to make @require_token to work.Munyoki Kilyungi
2025-04-24Remove early return in delete_wiki to complete query execution.Munyoki Kilyungi
2025-04-22Fix pylint errors.Munyoki Kilyungi
2025-04-22Implement delete_wiki API endpoint.Munyoki Kilyungi
2025-04-22Add function to delete wiki entries by wiki_id.Munyoki Kilyungi
2025-04-22Correctly ignore broad-expection-raised exceptions.Munyoki Kilyungi
2025-04-22Auto-pep8 files.Munyoki Kilyungi
2025-04-22Reduce arguments in run_async_cmd by using options dictionary.Munyoki Kilyungi
2025-04-14Include effect mean/SE for 4-way crosses in R/qtl resultszsloan
2025-04-08Pass application log-level to the worker.Frederick Muriuki Muriithi
2025-04-08Use computed job queue to avoid collisions.Frederick Muriuki Muriithi
2025-04-08Add a function to compute the job queue from the settings.Frederick Muriuki Muriithi
2025-04-08APPLICATION_ENVIRONMENT: New configuration variableFrederick Muriuki Muriithi
2025-04-08Add logging to worker.Frederick Muriuki Muriithi
2025-04-08sheepdog.worker: Pass in the queue name on the CLIFrederick Muriuki Muriithi
2025-04-08BUG: Provide a tuple, of tuple of floatsFrederick Muriuki Muriithi
2025-04-08Use correct key.Frederick Muriuki Muriithi
2025-04-08Indent code properly.Frederick Muriuki Muriithi
2025-04-08feat: Append GN3 computation completion marker to log file.Alexander_Kabui
2025-04-08fix: Pylint fix for unused variable.Alexander_Kabui
2025-04-07Remove debug logging: current_app.logger requires app context.Frederick Muriuki Muriithi
2025-04-07Log out debug messages separate from active statements.Frederick Muriuki Muriithi
2025-04-07Split the command if its a single, non-json-parseable string.Frederick Muriuki Muriithi
2025-03-27feat: Check for founder and covar file in rqtl2 metadata.Alexander_Kabui
2025-03-21Use HTTPS for LLM endpoint.Munyoki Kilyungi
2025-03-18Order species by species id.Munyoki Kilyungi
2025-03-07Merge pull request #218 from genenetwork/chores/refactor-qtl2-scriptAlexander Kabui
2025-03-07refactor function to process scan1 results.Alexander_Kabui
2025-03-07Convert wikiId and versionId to ints.Munyoki Kilyungi
2025-03-07Revert "fix: Replace file path fetching code in rqtl2.py with current_app.roo...Munyoki Kilyungi
2025-03-04Use self-holsted LLM API end-point.Munyoki Kilyungi
2025-03-04fix: Replace file path fetching code in rqtl2.py with current_app.root_pathMunyoki Kilyungi (aider)
2025-02-28Eliminate carriage-return and newline characters.Frederick Muriuki Muriithi
2025-02-28Print out the stack trace to help debug failures.Frederick Muriuki Muriithi
2025-02-28Fix issues caught by mypy.Frederick Muriuki Muriithi
2025-02-28Fix linting errors.Frederick Muriuki Muriithi
2025-02-26feat: Add utility function for reading files and improve loggingAlexander_Kabui
2025-02-25fix: handle extra columns in permutations CSV reader to prevent unpacking error.Alexander_Kabui
2025-02-24Fetch rscript from os env if it isn't set in the app's config.Munyoki Kilyungi
2025-02-21Fix versioning of WIKI entries.Munyoki Kilyungi
2025-02-20refactor: Skip permutation test when NO_OF_PERMUTATION less than 0.Alexander_Kabui
2025-02-19fix: Read and parse correct permutation file from R/qtl2.Alexander_Kabui
2025-02-19fix: Read and parse correct permutation file from R/qtl1Alexander_Kabui
2025-02-10feat: Add LMDB sample data retrieval API endpoint with testsMunyoki Kilyungi (aider)
2025-02-07refactor: Add rqtl2 default method and update unittests.Alexander_Kabui
2025-02-07feat: Add the qtl to method to be used.Alexander_Kabui
2025-02-07feat: Enable streaming functionality for rqtl2.Alexander_Kabui
2025-02-07fix: fix for fetching significance results.Alexander_Kabui
2025-02-06refactor: code refactoring.Alexander_Kabui
2025-02-06feat: Include the physical map position in results.Alexander_Kabui