genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2024-10-18	refactor: replace gn3.auth.db with gn3.sqlite_db_utils and drop all refs to g...	John Nduli
2024-10-18	refactor: move definition of auth errs and remove auth cli utils	John Nduli
2024-10-18	refactor: remove unused gn3.auth modules	John Nduli
2024-10-15	Lint: Fix linting errors.	Frederick Muriuki Muriithi
2024-10-15	Pass in correct file path.	Frederick Muriuki Muriithi
2024-10-15	fix: use require_token to validate gn3 apis	John Nduli
2024-10-14	Run python black against file.	Munyoki Kilyungi
2024-10-14	Replace CONSTRUCT with SELECT for fetching RIF NCBI entries.	Munyoki Kilyungi
2024-10-14	Add end-point for fetching NCBI metadata.	Munyoki Kilyungi
2024-10-14	Add function for fetching NCBI data.	Munyoki Kilyungi
2024-09-30	chore: pylint code fix	John Nduli
2024-09-30	feat: rollback mysql transaction when rdf insert fails	John Nduli
2024-09-30	fix: rdf and sql queries for fetching rif data	John Nduli
2024-09-27	Debug command.	Frederick Muriuki Muriithi
2024-09-27	Bug: Use absolute paths in place of relative paths.	Frederick Muriuki Muriithi
2024-09-27	Bug: Use absolute path in place of relative path	Frederick Muriuki Muriithi
2024-09-23	Revert "Remove one-line if/else statement."	Munyoki Kilyungi
2024-09-23	Remove one-line if/else statement.	Munyoki Kilyungi
2024-09-23	Use correct object modifier for a label when inserting a comment.	Munyoki Kilyungi
2024-09-23	Update docstring for "update_wiki_comment".	Munyoki Kilyungi
2024-09-23	Use correct object modifier in triple when fetching comment history.	Munyoki Kilyungi
2024-09-23	Use correct modifier when getting species name in SPARQL.	Munyoki Kilyungi
2024-09-23	Remove dead variable from RDF query.	Munyoki Kilyungi
2024-09-23	Alphabetically sort the categories and pubmed_ids array.	Munyoki Kilyungi
2024-09-23	Remove un-necessary triple in comment history RDF query.	Munyoki Kilyungi
2024-09-19	Use correct return type.	Munyoki Kilyungi
2024-09-19	Remove extraneous keyword.	Munyoki Kilyungi
2024-09-18	Pass in insert_dict instead of payload in "get_wiki_entries".	Munyoki Kilyungi
2024-09-18	Pass in the createtime as an arg when inserting into RDF graph.	Munyoki Kilyungi
2024-09-18	Get the next versionId from SQL.	Munyoki Kilyungi
2024-09-18	Update "POST /wiki/comment_id/edit" to have RDF edits.	Munyoki Kilyungi
2024-09-18	Fix typo.	Munyoki Kilyungi
2024-09-18	Add method that inserts new RIF comments.	Munyoki Kilyungi
2024-09-18	Fetch symbol by it's name.	Munyoki Kilyungi
2024-09-18	Fetch the next comment version in RDF.	Munyoki Kilyungi
2024-09-18	Rename sparql_construct_query -> sparql_query.	Munyoki Kilyungi
2024-09-18	Add new method for updating RDF Graph content.	Munyoki Kilyungi
2024-09-18	Run python-black against file.	Munyoki Kilyungi
2024-09-17	Fix C0411/C0412 pylint errors in gn3.api.metadata.api.wiki.	Munyoki Kilyungi
2024-09-17	fix: error when result dict contains None	John Nduli
2024-09-17	feat: require auth for edit api call	John Nduli
2024-09-12	Fix pylint errors.	Munyoki Kilyungi
2024-09-12	feat: pick results from sqlite3 if they were stored	John Nduli
2024-09-12	Initialise the package to ensure setuptools finds it.	Frederick Muriuki Muriithi
2024-09-12	BugFix: assign value and use variable.	Frederick Muriuki Muriithi
2024-09-12	Fix failing tests after merging in Pjotr's pull request.	Frederick Muriuki Muriithi
2024-09-12	Gracefully print out debug messages even outside app context	Frederick Muriuki Muriithi
2024-09-12	From gn3 only use TMPDIR/gn3 paths	Pjotr Prins
2024-09-12	Make sure dir exists before running R/qtl	Pjotr Prins
2024-09-12	Replace TMPDIR/output with TMPDIR/gn3 so it is clear where it comes from	Pjotr Prins