genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2021-05-26	Move the methods, "update" and "fetch", to gn3.db	BonfaceKilz
2021-05-26	db: phenotypes: Fix publication_mapping	BonfaceKilz
2021-05-26	db: phenotypes: Fix typo	BonfaceKilz
2021-05-25	Include code that processes rqtl output files and returns actual results inst...	zsloan
2021-05-20	db: phenotypes: Add function for fetching a single result	BonfaceKilz
2021-05-20	db: phenotypes: Add a dataclass map	BonfaceKilz
2021-05-20	db: phenotypes: Add Publication table mapping	BonfaceKilz
2021-05-20	db: phenotypes: Rename phenotype_column_mapping	BonfaceKilz
2021-05-20	db: phenotypes: Add Publication dataclass and mapping	BonfaceKilz
2021-05-20	db: phenotypes: Generalise the update function	BonfaceKilz
2021-05-20	db: phenotypes: Map a table to it's relevant dict mapping	BonfaceKilz
2021-05-20	db: phenotypes: Add type for Dataclass	BonfaceKilz
2021-05-20	db: phenotypes: Put mapping def after dataclass	BonfaceKilz
2021-05-20	db: phenotypes: Add phenotype table mapping	BonfaceKilz
2021-05-20	db: phenotypes: Add dataclass to represent PublishXRef	BonfaceKilz
2021-05-20	db: phenotype: Make "pylint: disable=[R0902]" global for file	BonfaceKilz
2021-05-20	db: phenotypes: Add a way of updating the Phenotype table	BonfaceKilz
2021-05-19	Temporarily replace forward-slashes with underscores, since they can be inclu...	zsloan
2021-05-18	Removed len from this if statement, since an empty list evaluates to False by...	zsloan
2021-05-18	Account for boolean kwargs in compute() by storing them in a list, since they...	zsloan
2021-05-18	Account for boolean kwargs in compose_rqtl_cmd	zsloan
2021-05-18	Fixed generate_rqtl_cmd to make the kwarg hash from a combination of keywords...	zsloan
2021-05-18	Fixed variety of issues detected by pylint	zsloan
2021-05-17	Created compose_rqtl_command and generate_rqtl_command to create the actual c...	zsloan
2021-05-17	Read in kwargs fromrequest and pass the command, tmpdir, and kwargs to genera...	zsloan
2021-05-17	Added RQTL_WRAPPER_CMD (which is fetched from environment) in settings.py	zsloan
2021-05-17	Add rqtl.py for rqtl endpoints	zsloan
2021-05-17	Register rqtl blueprint	zsloan
2021-05-15	resolve merge conflict	Alexander Kabui
2021-05-15	Merge branch 'main' into feature/minor-fixes	Alexander Kabui
2021-05-15	index lit tuple result	Alexander Kabui
2021-05-13	Add end-point for running an rQTL program	BonfaceKilz
2021-05-13	Rename file_utils to fs_helpers	BonfaceKilz
2021-05-13	computations: correlations: Apply pep-8	BonfaceKilz
2021-05-12	delete unused functions	Alexander Kabui
2021-05-12	rename lit_correlation_for_trait_list to lit_correlation_for_trait	Alexander Kabui
2021-05-12	rename tissue_correlation_for_trait_list with tissue_correlation_for_trait	Alexander Kabui
2021-05-12	rename p_val ro tissue_p_value for tissue_results	Alexander Kabui
2021-05-10	db: species: Add method for fetching all species	BonfaceKilz
2021-05-08	db: species: Fetch chromosomes using a group or species name	BonfaceKilz
2021-05-08	gn3: db_utils: Remove mypy ignore stub	BonfaceKilz
2021-05-08	Fix pep-8 errors	BonfaceKilz
2021-05-08	db: traits: Add extra method for looking up webqtl datasets	BonfaceKilz
2021-05-08	db: traits: Update method for inserting publication method	BonfaceKilz
2021-05-08	Add method for inserting publication_data	BonfaceKilz
2021-05-08	Add webqtlCaseData DS to keep track of case data in one trait	BonfaceKilz
2021-05-08	Replace namedtuple with a dataclass	BonfaceKilz
2021-05-08	Add method for inserting phenotypes	BonfaceKilz
2021-05-08	Add method for inserting publications	BonfaceKilz
2021-05-08	Add method to fetch riset name and id	BonfaceKilz