aboutsummaryrefslogtreecommitdiff
path: root/gn3
AgeCommit message (Expand)Author
2021-09-16Intergrate the heatmap generation with the APIFrederick Muriuki Muriithi
2021-09-16Fix minor bugsFrederick Muriuki Muriithi
2021-09-16Add missing importsFrederick Muriuki Muriithi
2021-09-15Update entry-point function for heatmap generationFrederick Muriuki Muriithi
2021-09-15Generate heatmaps in a single plotFrederick Muriuki Muriithi
2021-09-15Process data into format usable by heatmapsFrederick Muriuki Muriithi
2021-09-15Integrate get_lsr_from_chr functionFrederick Muriuki Muriithi
2021-09-15Reorganise modulesFrederick Muriuki Muriithi
2021-09-08Ease search for traits and chromosomesMuriithi Frederick Muriuki
2021-09-08Parse Chr value as int where possibleMuriithi Frederick Muriuki
2021-09-08Remove extraneous text to ease sortingMuriithi Frederick Muriuki
2021-09-08Fix the traits order computations for clusteringMuriithi Frederick Muriuki
2021-09-06Provide function to organise parsed QTLReaper resultsMuriithi Frederick Muriuki
2021-09-06Leave "Chr" value as string when parsingMuriithi Frederick Muriuki
2021-09-06Handle type-coercion exceptionsMuriithi Frederick Muriuki
2021-09-06Find nearest markerMuriithi Frederick Muriuki
2021-09-01Fix linting and typing issuesMuriithi Frederick Muriuki
2021-09-01Built top-level genotype file parsing functionMuriithi Frederick Muriuki
2021-09-01Parse data lines into markersMuriithi Frederick Muriuki
2021-09-01Parse the genotype file's data headerMuriithi Frederick Muriuki
2021-09-01Implement parsing of genotype labelsMuriithi Frederick Muriuki
2021-08-31Fix linting errors, minor bugs and reorganise codeMuriithi Frederick Muriuki
2021-08-31Update `heatmap_data` function: remove extraneous dataMuriithi Frederick Muriuki
2021-08-31Parse QTLReaper outputsMuriithi Frederick Muriuki
2021-08-31Fix bugs with `run_reaper` functionMuriithi Frederick Muriuki
2021-08-31Provide utilities for genotype filesMuriithi Frederick Muriuki
2021-08-30Fix issues with traits file formatMuriithi Frederick Muriuki
2021-08-30Remove empty lineMuriithi Frederick Muriuki
2021-08-30Fix some linting errors and minor bugs.Muriithi Frederick Muriuki
2021-08-30Implement module for interfacing with rust-qtlreaperMuriithi Frederick Muriuki
2021-08-27Provide intermediate data in final resultsMuriithi Frederick Muriuki
2021-08-27Export trait data to fileMuriithi Frederick Muriuki
2021-08-27Rework strains and trait values retrievalMuriithi Frederick Muriuki
2021-08-20Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_gener...Muriithi Frederick Muriuki
2021-08-20Fix typing issue(s) caught by mypyMuriithi Frederick Muriuki
2021-08-20Retrieve the strains with valid valuesMuriithi Frederick Muriuki
2021-08-20Add tests for ordering and implement functionMuriithi Frederick Muriuki
2021-08-20Minor correlation fixes (#36)Alexander Kabui
2021-08-18Test the clusteringMuriithi Frederick Muriuki
2021-08-18Fix obvious linting errorsMuriithi Frederick Muriuki
2021-08-18Make child sequence a listMuriithi Frederick Muriuki
2021-08-18Provide top-level `riset` key-value pairMuriithi Frederick Muriuki
2021-08-18Add tests and fix errors caught with testsMuriithi Frederick Muriuki
2021-08-18Fix errors: add in missing parenthesisMuriithi Frederick Muriuki
2021-08-18Initialise heatmap generation moduleMuriithi Frederick Muriuki
2021-08-17Test the clusteringMuriithi Frederick Muriuki
2021-08-17Fix obvious linting errorsMuriithi Frederick Muriuki
2021-08-17Make child sequence a listMuriithi Frederick Muriuki
2021-08-17Provide top-level `riset` key-value pairMuriithi Frederick Muriuki
2021-08-17Add tests and fix errors caught with testsMuriithi Frederick Muriuki
generated by cgit v1.2.3 (git 2.44.0) at 2024-11-22 07:52:55 +0000