index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2023-06-30
List all OAuth2 clients.
Frederick Muriuki Muriithi
2023-06-23
Fetch all collections, rename variables
Frederick Muriuki Muriithi
2023-06-20
Fix conflicts
zsloan
2023-06-20
Bug: Don't overwrite/delete old collections
Frederick Muriuki Muriithi
2023-06-15
Fetch genotypes from virtuoso
Munyoki Kilyungi
2023-06-13
Namespace session variable
Frederick Muriuki Muriithi
2023-06-12
Delete unused import
Munyoki Kilyungi
2023-06-12
Fetch phenotypes from virtuoso
Munyoki Kilyungi
2023-06-12
Correct publication function docstring
Munyoki Kilyungi
2023-06-12
Delete unused get_trait_metadata function
Munyoki Kilyungi
2023-06-08
Fix bugs with accessing/creating collections
zsloan
2023-06-07
auth: Remove "migrate-data" scope.
Frederick Muriuki Muriithi
2023-06-07
auth: Remove obsoleted scope
Frederick Muriuki Muriithi
2023-06-07
Add publication end-point
Munyoki Kilyungi
2023-06-07
Nest duplicate entries into a list from a sparql result
Munyoki Kilyungi
2023-06-07
Remove trait_metadata endpoint
Munyoki Kilyungi
2023-06-06
Pass geoSeries as a URL
Munyoki Kilyungi
2023-06-06
Rename gn:geoPlatform -> gn:geoPlatformUrl
Munyoki Kilyungi
2023-06-06
Match how dataset metadata is fetched with GN1
Munyoki Kilyungi
2023-06-06
Replace taxon prefix with ncbiTaxon which references NCBI
Munyoki Kilyungi
2023-06-06
Rename dataset_metadata -> dataset
Munyoki Kilyungi
2023-06-05
Logging: Don't allow getting user info to stop application starting
Frederick Muriuki Muriithi
2023-06-05
Logging: Get user information.
Frederick Muriuki Muriithi
2023-06-05
Logging: Get guix profile information if present.
Frederick Muriuki Muriithi
2023-06-05
Logging: Get info about python
Frederick Muriuki Muriithi
2023-06-05
Handle unhandled SQLite3 errors.
Frederick Muriuki Muriithi
2023-06-02
Replace SELECT with CONSTRUCT when fetching a dataset's metadata
Munyoki Kilyungi
2023-06-02
Create a function for stripping the last bit from a URL
Munyoki Kilyungi
2023-05-30
Provide logout link.
Frederick Muriuki Muriithi
2023-05-30
auth: Change check for client secret
Frederick Muriuki Muriithi
2023-05-29
auth: Enable registration of OAuth2 clients
Frederick Muriuki Muriithi
2023-05-29
Enable Administrator login on GN3
Frederick Muriuki Muriithi
2023-05-27
Document Use of OAuth2 Clients
Frederick Muriuki Muriithi
2023-05-25
Script to assign existing data to publicly-visible resources
Frederick Muriuki Muriithi
2023-05-25
Set whether resource is publicly viewable on creation
Frederick Muriuki Muriithi
2023-05-23
auth: Enable user masquerade
Frederick Muriuki Muriithi
2023-05-22
Use string literal concatenation to make genofile_path line shorter
zsloan
2023-05-22
Fix quotes when setting genofile_path
zsloan
2023-05-22
Fix return typing for get_trait_sample_data
zsloan
2023-05-22
Change type from 'any' to 'Any'
zsloan
2023-05-22
Use f-string for setting genofile_path
zsloan
2023-05-22
Include encoding in open statement to address pylint W1514
zsloan
2023-05-22
Initialize 'line'; previous pylint complained because line might not be initi...
zsloan
2023-05-22
Use 'with open()' syntax
zsloan
2023-05-22
Remove unused variable this_data
zsloan
2023-05-22
Include all samples in trait sample data
zsloan
2023-05-22
Fix sample data CSV query to only fetch distinct samples
zsloan
2023-05-22
Fix get_trait_sample_data function
zsloan
2023-05-22
Fix retrieve_sample_list function to correctly get genofile_path
zsloan
2023-05-22
Commit update/insert queries, since they don't seem to be executed otherwise ...
zsloan
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