| Age | Commit message (Expand) | Author |
|---|
| 2021-06-18 | Fixed pylint issues | zsloan |
| 2021-06-18 | Resolve mypy errors in computations/rqtl.py | zsloan |
| 2021-06-18 | Fixed spelling of coeffient to coefficient | zsloan |
| 2021-06-18 | Rename json_data column to json_diff_data | BonfaceKilz |
| 2021-06-18 | gn3: db: Fix how columns from tables is resolved | BonfaceKilz |
| 2021-06-18 | gn3: db: Add "id_" property to metadata_audit class and mapping | BonfaceKilz |
| 2021-06-18 | gn3: db: Add "fetchall" method. | BonfaceKilz |
| 2021-06-18 | gn3: metadata_audit: Make props for MetadataAudit class optional | BonfaceKilz |
| 2021-06-18 | gn3: db: Make "WHERE" clause optional•••* gn3/db/__init__.py (fetchone): Make "WHERE" an Optional arg.
| BonfaceKilz |
| 2021-06-18 | gn3: db: Use correct DATACLASSMAP entry from metadata_audit | BonfaceKilz |
| 2021-06-18 | gn3: db: sort imports | BonfaceKilz |
| 2021-06-18 | gn3: db: Remove "escape_string" from imports•••We use prepared statements, so no need to have this.
| BonfaceKilz |
| 2021-06-18 | Use prepared statements for FETCH sql function | BonfaceKilz |
| 2021-06-18 | gn3: db: Replace items() with keys()•••* gn3/db/__init__.py (diff_from_dict): We only use the keys of the dict!
| BonfaceKilz |
| 2021-06-18 | Use prepared statements for UPDATE sql function | BonfaceKilz |
| 2021-06-18 | gn3: db: Add new function for doing sql INSERT | BonfaceKilz |
| 2021-06-18 | Add data structures for the table metadata_audit | BonfaceKilz |
| 2021-06-18 | gn3: db: Add spacing before around "AND" in sql clause | BonfaceKilz |
| 2021-06-18 | Get the diff between 2 dicts and return that as a dict | BonfaceKilz |
| 2021-06-18 | gn3: db: Return None if data and where are empty | BonfaceKilz |
| 2021-06-18 | fix index error (#16) | Alexander Kabui |
| 2021-06-18 | Move the methods, "update" and "fetch", to gn3.db | BonfaceKilz |
| 2021-06-18 | db: phenotypes: Fix publication_mapping | BonfaceKilz |
| 2021-06-18 | db: phenotypes: Fix typo | BonfaceKilz |
| 2021-06-18 | db: phenotypes: Add function for fetching a single result•••* gn3/db/phenotypes.py (fetchone): New function.
| BonfaceKilz |
| 2021-06-18 | db: phenotypes: Add a dataclass map•••Maps a string to it's dataclass.
| BonfaceKilz |
| 2021-06-18 | db: phenotypes: Add Publication table mapping | BonfaceKilz |
| 2021-06-18 | db: phenotypes: Rename phenotype_column_mapping | BonfaceKilz |
| 2021-06-18 | db: phenotypes: Add Publication dataclass and mapping | BonfaceKilz |
| 2021-06-18 | db: phenotypes: Generalise the update function•••* gn3/db/phenotypes.py (update_phenotype): Delete it.
(update): New, more general function.
| BonfaceKilz |
| 2021-06-18 | db: phenotypes: Map a table to it's relevant dict mapping | BonfaceKilz |
| 2021-06-18 | db: phenotypes: Add type for Dataclass•••See: https://www.py4u.net/discuss/188952
| BonfaceKilz |
| 2021-06-18 | db: phenotypes: Put mapping def after dataclass | BonfaceKilz |
| 2021-06-18 | db: phenotypes: Add phenotype table mapping | BonfaceKilz |
| 2021-06-18 | db: phenotypes: Add dataclass to represent PublishXRef | BonfaceKilz |
| 2021-06-18 | db: phenotype: Make "pylint: disable=[R0902]" global for file | BonfaceKilz |
| 2021-06-18 | db: phenotypes: Add a way of updating the Phenotype table•••* gn3/db/phenotypes.py (Phenotype): New dataclass.
(update_phenotype): New function.
[phenotype_column_mapping]: New variable.
| BonfaceKilz |
| 2021-06-18 | Fixed issue where all bool kwargs were always being passed to generate_rqtl_c... | zsloan |
| 2021-06-18 | Fix R/qtl command and the way keyword arguments are passed | zsloan |
| 2021-06-16 | add r-wgna package | Alexander Kabui |
| 2021-06-16 | minor fix | Alexander Kabui |
| 2021-06-16 | refactor script and add tests | Alexander Kabui |
| 2021-06-16 | add fetch args function | Alexander Kabui |
| 2021-06-15 | fix script path issues | Alexander Kabui |
| 2021-06-14 | fix missing call to bicorAndPvalue | Alexander Kabui |
| 2021-06-14 | add biweight r script and tests | Alexander Kabui |
| 2021-06-07 | Rename json_data column to json_diff_data | BonfaceKilz |
| 2021-06-07 | gn3: db: Fix how columns from tables is resolved | BonfaceKilz |
| 2021-06-07 | gn3: db: Add "id_" property to metadata_audit class and mapping | BonfaceKilz |
| 2021-06-07 | gn3: db: Add "fetchall" method. | BonfaceKilz |
