genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2021-05-30	fix index error (#16)	Alexander Kabui
2021-05-26	Move the methods, "update" and "fetch", to gn3.db	BonfaceKilz
2021-05-26	db: phenotypes: Fix publication_mapping	BonfaceKilz
2021-05-26	db: phenotypes: Fix typo	BonfaceKilz
2021-05-20	db: phenotypes: Add function for fetching a single result	BonfaceKilz
2021-05-20	db: phenotypes: Add a dataclass map	BonfaceKilz
2021-05-20	db: phenotypes: Add Publication table mapping	BonfaceKilz
2021-05-20	db: phenotypes: Rename phenotype_column_mapping	BonfaceKilz
2021-05-20	db: phenotypes: Add Publication dataclass and mapping	BonfaceKilz
2021-05-20	db: phenotypes: Generalise the update function	BonfaceKilz
2021-05-20	db: phenotypes: Map a table to it's relevant dict mapping	BonfaceKilz
2021-05-20	db: phenotypes: Add type for Dataclass	BonfaceKilz
2021-05-20	db: phenotypes: Put mapping def after dataclass	BonfaceKilz
2021-05-20	db: phenotypes: Add phenotype table mapping	BonfaceKilz
2021-05-20	db: phenotypes: Add dataclass to represent PublishXRef	BonfaceKilz
2021-05-20	db: phenotype: Make "pylint: disable=[R0902]" global for file	BonfaceKilz
2021-05-20	db: phenotypes: Add a way of updating the Phenotype table	BonfaceKilz
2021-05-15	resolve merge conflict	Alexander Kabui
2021-05-15	Merge branch 'main' into feature/minor-fixes	Alexander Kabui
2021-05-15	index lit tuple result	Alexander Kabui
2021-05-13	Add end-point for running an rQTL program	BonfaceKilz
2021-05-13	Rename file_utils to fs_helpers	BonfaceKilz
2021-05-13	computations: correlations: Apply pep-8	BonfaceKilz
2021-05-12	delete unused functions	Alexander Kabui
2021-05-12	rename lit_correlation_for_trait_list to lit_correlation_for_trait	Alexander Kabui
2021-05-12	rename tissue_correlation_for_trait_list with tissue_correlation_for_trait	Alexander Kabui
2021-05-12	rename p_val ro tissue_p_value for tissue_results	Alexander Kabui
2021-05-10	db: species: Add method for fetching all species	BonfaceKilz
2021-05-08	db: species: Fetch chromosomes using a group or species name	BonfaceKilz
2021-05-08	gn3: db_utils: Remove mypy ignore stub	BonfaceKilz
2021-05-08	Fix pep-8 errors	BonfaceKilz
2021-05-08	db: traits: Add extra method for looking up webqtl datasets	BonfaceKilz
2021-05-08	db: traits: Update method for inserting publication method	BonfaceKilz
2021-05-08	Add method for inserting publication_data	BonfaceKilz
2021-05-08	Add webqtlCaseData DS to keep track of case data in one trait	BonfaceKilz
2021-05-08	Replace namedtuple with a dataclass	BonfaceKilz
2021-05-08	Add method for inserting phenotypes	BonfaceKilz
2021-05-08	Add method for inserting publications	BonfaceKilz
2021-05-08	Add method to fetch riset name and id	BonfaceKilz
2021-05-08	Add endpoints for (batch) entering phenotypes and genotypes	BonfaceKilz
2021-05-08	Add extra procedure for parsing a genotype file	BonfaceKilz
2021-05-03	add default no of cores	Alexander Kabui
2021-05-03	modify default SQL_URI	Alexander Kabui
2021-05-03	add trait_id fix mypy issues	Alexander Kabui
2021-05-03	minor fixes for tiss correlation tests and naming	Alexander Kabui
2021-05-03	replace database with conn	Alexander Kabui
2021-05-02	remove trait and dataset blueprint	Alexander Kabui
2021-05-02	delete dataset and trait files	Alexander Kabui
2021-04-20	pep8 formatting	Alexander Kabui
2021-04-20	add experiment function for computing tissue correlation using multiprocessing	Alexander Kabui