genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2021-06-18	Fixed pylint issues	zsloan
2021-06-18	Resolve mypy errors in computations/rqtl.py	zsloan
2021-06-18	Fixed spelling of coeffient to coefficient	zsloan
2021-06-18	Rename json_data column to json_diff_data	BonfaceKilz
2021-06-18	gn3: db: Fix how columns from tables is resolved	BonfaceKilz
2021-06-18	gn3: db: Add "id_" property to metadata_audit class and mapping	BonfaceKilz
2021-06-18	gn3: db: Add "fetchall" method.	BonfaceKilz
2021-06-18	gn3: metadata_audit: Make props for MetadataAudit class optional	BonfaceKilz
2021-06-18	gn3: db: Make "WHERE" clause optional...* gn3/db/__init__.py (fetchone): Make "WHERE" an Optional arg.	BonfaceKilz
2021-06-18	gn3: db: Use correct DATACLASSMAP entry from metadata_audit	BonfaceKilz
2021-06-18	gn3: db: sort imports	BonfaceKilz
2021-06-18	gn3: db: Remove "escape_string" from imports...We use prepared statements, so no need to have this.	BonfaceKilz
2021-06-18	Use prepared statements for FETCH sql function	BonfaceKilz
2021-06-18	gn3: db: Replace items() with keys()...* gn3/db/__init__.py (diff_from_dict): We only use the keys of the dict!	BonfaceKilz
2021-06-18	Use prepared statements for UPDATE sql function	BonfaceKilz
2021-06-18	gn3: db: Add new function for doing sql INSERT	BonfaceKilz
2021-06-18	Add data structures for the table metadata_audit	BonfaceKilz
2021-06-18	gn3: db: Add spacing before around "AND" in sql clause	BonfaceKilz
2021-06-18	Get the diff between 2 dicts and return that as a dict	BonfaceKilz
2021-06-18	gn3: db: Return None if data and where are empty	BonfaceKilz
2021-06-18	fix index error (#16)	Alexander Kabui
2021-06-18	Move the methods, "update" and "fetch", to gn3.db	BonfaceKilz
2021-06-18	db: phenotypes: Fix publication_mapping	BonfaceKilz
2021-06-18	db: phenotypes: Fix typo	BonfaceKilz
2021-06-18	db: phenotypes: Add function for fetching a single result...* gn3/db/phenotypes.py (fetchone): New function.	BonfaceKilz
2021-06-18	db: phenotypes: Add a dataclass map...Maps a string to it's dataclass.	BonfaceKilz
2021-06-18	db: phenotypes: Add Publication table mapping	BonfaceKilz
2021-06-18	db: phenotypes: Rename phenotype_column_mapping	BonfaceKilz
2021-06-18	db: phenotypes: Add Publication dataclass and mapping	BonfaceKilz
2021-06-18	db: phenotypes: Generalise the update function...* gn3/db/phenotypes.py (update_phenotype): Delete it. (update): New, more general function.	BonfaceKilz
2021-06-18	db: phenotypes: Map a table to it's relevant dict mapping	BonfaceKilz
2021-06-18	db: phenotypes: Add type for Dataclass...See: https://www.py4u.net/discuss/188952	BonfaceKilz
2021-06-18	db: phenotypes: Put mapping def after dataclass	BonfaceKilz
2021-06-18	db: phenotypes: Add phenotype table mapping	BonfaceKilz
2021-06-18	db: phenotypes: Add dataclass to represent PublishXRef	BonfaceKilz
2021-06-18	db: phenotype: Make "pylint: disable=[R0902]" global for file	BonfaceKilz
2021-06-18	db: phenotypes: Add a way of updating the Phenotype table...* gn3/db/phenotypes.py (Phenotype): New dataclass. (update_phenotype): New function. [phenotype_column_mapping]: New variable.	BonfaceKilz
2021-06-18	Fixed issue where all bool kwargs were always being passed to generate_rqtl_c...	zsloan
2021-06-18	Fix R/qtl command and the way keyword arguments are passed	zsloan
2021-05-25	Include code that processes rqtl output files and returns actual results inst...	zsloan
2021-05-19	Temporarily replace forward-slashes with underscores, since they can be inclu...	zsloan
2021-05-18	Removed len from this if statement, since an empty list evaluates to False by...	zsloan
2021-05-18	Account for boolean kwargs in compute() by storing them in a list, since they...	zsloan
2021-05-18	Account for boolean kwargs in compose_rqtl_cmd	zsloan
2021-05-18	Fixed generate_rqtl_cmd to make the kwarg hash from a combination of keywords...	zsloan
2021-05-18	Fixed variety of issues detected by pylint	zsloan
2021-05-17	Created compose_rqtl_command and generate_rqtl_command to create the actual c...	zsloan
2021-05-17	Read in kwargs fromrequest and pass the command, tmpdir, and kwargs to genera...	zsloan
2021-05-17	Added RQTL_WRAPPER_CMD (which is fetched from environment) in settings.py	zsloan
2021-05-17	Add rqtl.py for rqtl endpoints	zsloan