genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Collapse)	Author
2021-06-20	merge main	Alexander Kabui

2021-06-20	make requested changes to biweight	Alexander Kabui

2021-05-17	Added RQTL_WRAPPER_CMD (which is fetched from environment) in settings.py	zsloan

2021-05-13	Add end-point for running an rQTL program	BonfaceKilz
	* gn3/api/general.py (run_r_qtl): New function. * gn3/settings.py: New variable.
2021-05-03	modify default SQL_URI	Alexander Kabui

2021-04-12	fix merge conflict	Alexander Kabui

2021-04-12	Integrate correlation API	Alexander Kabui
	- add new api for gn2-gn3 sample r integration - delete map for sample list to values - add db util file - add python msql-client dependency - add db for fetching lit correlation results - add unittests for db utils - add tests for db_utils - modify api for fetching lit correlation results - refactor Mock Database Connector and unittests - add sql url parser - add SQL URI env variable - refactor code for db utils - modify return data for lit correlation - refactor tissue correlation endpoint - replace db_instance with conn
2021-03-31	add mysqlclient in guix	Alexander Kabui
	add env variable for GN2_URL
2021-03-23	Use ipfs to get genotype files	BonfaceKilz

2021-03-15	Delete redundant gn3/config.py	BonfaceKilz
	All default confs should go to one place: gn3/setting.py * gn3/app.py: Delete get_config. Apply pep-8 formatting. * gn3/config.py: Delete it. Move conf options to... * gn3/settings.py: ... here.
2021-03-08	Replace APP_DEFAULTS dict with actual conf params	BonfaceKilz

2021-03-08	Make the name of the redis job queue configurable	BonfaceKilz

2021-02-24	Add GENODIR extra param	BonfaceKilz

2021-02-16	Add extra default config for bcrypt	BonfaceKilz

2021-02-15	Add default redis config	BonfaceKilz

2021-02-12	Add configuration file for the project	BonfaceKilz