Age | Commit message (Collapse) | Author |
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The genotype database format now supports versioning of matrices. So, we
update genodb.py to return only the most recent genotype matrix.
* gn3/genodb.py (GenotypeDatabase.matrix): Return only the most recent
genotype matrix.
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* gn3/genodb.py (GenotypeDatabase.__init__): Open genotype database in
read-only mode.
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* gn3/genodb.py (GenotypeDatabase.__init__): Do not create genotype database
if it does not exist.
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It has been decided that the genotype database will use little endianness
wherever applicable.
* gn3/genodb.py (Matrix.__init__): Remove TODO note to decide on endianness.
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* gn3/genodb.py (GenotypeDatabase.get_metadata, GenotypeDatabase.matrix): Do
not terminate database strings with the null character.
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genodb is a tiny library to read our new genotype database file format.
* gn3/genodb.py: New file.
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