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path: root/gn3/file_utils.py
AgeCommit message (Expand)Author
2021-03-10Extract file to the correct locationBonfaceKilz
2021-03-08Create a more generic procedure for getting hash values of files...* gn3/file_utils.py (get_hash_of_values): New procedure. (get_dir_hash): Use more generic "get_hash_of_values" to compute the hash of a directory. BonfaceKilz
2021-03-08Replace APP_DEFAULTS dict with actual conf paramsBonfaceKilz
2021-03-08Delete "lookup_file" procedureBonfaceKilz
2021-03-08Extract files to "/TMPDIR/TOKEN"...TOKEN is the user token * gn3/file_utils.py (extract_uploaded_file): Add extra param "token". If a token is empty, create a new directory based off that token. * tests/unit/test_file_utils.py: Update failing tests. BonfaceKilz
2021-03-08Move "generate_random_n_string" to file_utils...* gn3/computations/gemma.py (generaten_random_n_string): Move to... * gn3/file_utils.py: ... here. BonfaceKilz
2021-02-16Add procedure for uploading gzipped file...* gn3/file_utils.py (extract_uploaded_file): New procedure. * tests/unit/test_file_utils.py: Test cases for ^^. * tests/unit/upload-data.tar.gz: New test data. BonfaceKilz
2021-02-12Add configuration file for the projectBonfaceKilz
2021-02-12Use sorted list of files when calculating md5sums of directory...* gn3/file_utils.py (get_dir_hash): Sort list of files before calculating their md5sums. * tests/unit/test_file_utils.py (test_get_dir_hash): Update test-case md5sum. BonfaceKilz
2021-02-12Add new procedure to return a python dict from a json file...* gn3/file_utils.py (jsonfile_to_dict): New procedure * tests/unit/test_file_utils.py: New test-cases. BonfaceKilz
2021-02-12Add new procedure for looking up files in a given ENV variable...* gn3/file_utils.py (lookup_file): New function. * tests/unit/test_file_utils.py: New test cases for ^^. BonfaceKilz
2021-02-12Add function for computing the hash of a directoryBonfaceKilz