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genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2021-08-05
Reorganise the database code
Muriithi Frederick Muriuki
2021-08-05
Build up trait_name items from full name
Muriithi Frederick Muriuki
2021-08-04
Fix issues caught by pylint
Muriithi Frederick Muriuki
2021-08-04
Retrieve the RISet and RISet ID values
Muriithi Frederick Muriuki
2021-08-04
Add tests for post-processing functions
Muriithi Frederick Muriuki
2021-08-04
Avoid string interpolation: use prepared statement
Muriithi Frederick Muriuki
2021-07-30
Rework db functions to enable postprocessing
Muriithi Frederick Muriuki
2021-07-30
Return dict from query functions
Muriithi Frederick Muriuki
2021-07-29
Merge branch 'main' into Feature/Update-db-from-csv-data
BonfaceKilz
2021-07-29
Delete "update_raw" and it's test-cases
BonfaceKilz
2021-07-29
Add method for updating values from a sample dataset
BonfaceKilz
2021-07-29
Add type annotations to the function
Muriithi Frederick Muriuki
2021-07-29
Retrieve trait information
Muriithi Frederick Muriuki
2021-07-29
Make name retrieval more general
Muriithi Frederick Muriuki
2021-07-29
Retrieve 'ProbeSet' trait name
Muriithi Frederick Muriuki
2021-07-29
db: traits: Remove publishdata column
BonfaceKilz
2021-07-26
gn3: db: Create a raw update query
BonfaceKilz
2021-07-26
db: traits: Fetch sample_data from a trait in csv form
BonfaceKilz
2021-07-26
db: traits: Remove unused functions
BonfaceKilz
2021-07-10
gn3: db: Use correct type for columns arg in fetch functions
BonfaceKilz
2021-07-10
Fix pylint issues
BonfaceKilz
2021-07-10
gn3: db: Add extra argument to specify column in fetch statements
BonfaceKilz
2021-07-10
db: phenotypes: Add Probeset data structures
BonfaceKilz
2021-06-07
Rename json_data column to json_diff_data
BonfaceKilz
2021-06-07
gn3: db: Fix how columns from tables is resolved
BonfaceKilz
2021-06-07
gn3: db: Add "id_" property to metadata_audit class and mapping
BonfaceKilz
2021-06-07
gn3: db: Add "fetchall" method.
BonfaceKilz
2021-06-07
gn3: metadata_audit: Make props for MetadataAudit class optional
BonfaceKilz
2021-06-07
gn3: db: Make "WHERE" clause optional
BonfaceKilz
2021-06-07
gn3: db: Use correct DATACLASSMAP entry from metadata_audit
BonfaceKilz
2021-06-07
gn3: db: sort imports
BonfaceKilz
2021-06-03
gn3: db: Remove "escape_string" from imports
BonfaceKilz
2021-06-03
Use prepared statements for FETCH sql function
BonfaceKilz
2021-06-03
gn3: db: Replace items() with keys()
BonfaceKilz
2021-06-03
Use prepared statements for UPDATE sql function
BonfaceKilz
2021-06-03
gn3: db: Add new function for doing sql INSERT
BonfaceKilz
2021-06-03
Add data structures for the table metadata_audit
BonfaceKilz
2021-06-03
gn3: db: Add spacing before around "AND" in sql clause
BonfaceKilz
2021-06-03
Get the diff between 2 dicts and return that as a dict
BonfaceKilz
2021-06-03
gn3: db: Return None if data and where are empty
BonfaceKilz
2021-05-26
Move the methods, "update" and "fetch", to gn3.db
BonfaceKilz
2021-05-26
db: phenotypes: Fix publication_mapping
BonfaceKilz
2021-05-26
db: phenotypes: Fix typo
BonfaceKilz
2021-05-20
db: phenotypes: Add function for fetching a single result
BonfaceKilz
2021-05-20
db: phenotypes: Add a dataclass map
BonfaceKilz
2021-05-20
db: phenotypes: Add Publication table mapping
BonfaceKilz
2021-05-20
db: phenotypes: Rename phenotype_column_mapping
BonfaceKilz
2021-05-20
db: phenotypes: Add Publication dataclass and mapping
BonfaceKilz
2021-05-20
db: phenotypes: Generalise the update function
BonfaceKilz
2021-05-20
db: phenotypes: Map a table to it's relevant dict mapping
BonfaceKilz
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