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AgeCommit message (Expand)Author
2021-11-22Make the DB connection argument the firstFrederick Muriuki Muriithi
2021-11-04Add some condition checking functionsFrederick Muriuki Muriithi
2021-11-04Fix linting and typing errorsFrederick Muriuki Muriithi
2021-11-04Rework sorting: remove `compare_tissue_correlation_absolute_values`Frederick Muriuki Muriithi
2021-11-04Complete `build_temporary_tissue_correlations_table`Frederick Muriuki Muriithi
2021-11-04Move `correlations_of_all_tissue_traits`Frederick Muriuki Muriithi
2021-11-04Add missing commaFrederick Muriuki Muriithi
2021-11-04Move the function to computations moduleFrederick Muriuki Muriithi
2021-11-04Remove if clauses: replace with dictFrederick Muriuki Muriithi
2021-11-04Stub out `batch_computed_tissue_correlation` functionFrederick Muriuki Muriithi
2021-11-04Complete `correlations_of_all_tissue_traits`Frederick Muriuki Muriithi
2021-11-04Implement `fetch_gene_symbol_tissue_value_dict_for_trait`Frederick Muriuki Muriithi
2021-10-25Start implementation of `fetch_tissue_correlations` and dependenciesFrederick Muriuki Muriithi
2021-10-25Implement `fetch_literature_correlations` and depedenciesFrederick Muriuki Muriithi
2021-10-25Implement `get_filename` for correlationsFrederick Muriuki Muriithi
2021-10-21Implement `translate_to_mouse_gene_id` functionFrederick Muriuki Muriithi
2021-10-18Move `export_informative` function to `gn3.db.traits` moduleFrederick Muriuki Muriithi
2021-10-18Move 'export_trait_data' to 'gn3.db.traits' moduleFrederick Muriuki Muriithi
2021-09-27Update terminology: `riset` to `group`Frederick Muriuki Muriithi
2021-09-27Update terminology: `strain` to `sample`Frederick Muriuki Muriithi
2021-09-22Fix more pylint errorsFrederick Muriuki Muriithi
2021-09-22Fix typing issuesFrederick Muriuki Muriithi
2021-09-22Fix pylint errorsFrederick Muriuki Muriithi
2021-09-17Fix a number of linting issuesFrederick Muriuki Muriithi
2021-09-01Fix linting and typing issuesMuriithi Frederick Muriuki
2021-09-01Built top-level genotype file parsing functionMuriithi Frederick Muriuki
2021-09-01Parse data lines into markersMuriithi Frederick Muriuki
2021-09-01Parse the genotype file's data headerMuriithi Frederick Muriuki
2021-09-01Implement parsing of genotype labelsMuriithi Frederick Muriuki
2021-08-31Fix linting errors, minor bugs and reorganise codeMuriithi Frederick Muriuki
2021-08-31Update `heatmap_data` function: remove extraneous dataMuriithi Frederick Muriuki
2021-08-31Provide utilities for genotype filesMuriithi Frederick Muriuki
2021-08-17Provide top-level `riset` key-value pairMuriithi Frederick Muriuki
2021-08-17Fix errors: add in missing parenthesisMuriithi Frederick Muriuki
2021-08-09Set up the trait dataset type correctlyMuriithi Frederick Muriuki
2021-08-09Retrieve the trait dataMuriithi Frederick Muriuki
2021-08-09Add missing arguments. Fix typo.Muriithi Frederick Muriuki
2021-08-09Fix linting errorsMuriithi Frederick Muriuki
2021-08-08Only load extra data if the traits have basic infoMuriithi Frederick Muriuki
2021-08-08Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_decom...Muriithi Frederick Muriuki
2021-08-05db: traits: Return unique values when fetching sample dataBonfaceKilz
2021-08-05Reorganise the database codeMuriithi Frederick Muriuki
2021-08-05Build up trait_name items from full nameMuriithi Frederick Muriuki
2021-08-04Fix issues caught by pylintMuriithi Frederick Muriuki
2021-08-04Retrieve the RISet and RISet ID valuesMuriithi Frederick Muriuki
2021-08-04Add tests for post-processing functionsMuriithi Frederick Muriuki
2021-08-04Avoid string interpolation: use prepared statementMuriithi Frederick Muriuki
2021-07-30Rework db functions to enable postprocessingMuriithi Frederick Muriuki
2021-07-30Return dict from query functionsMuriithi Frederick Muriuki
2021-07-29Merge branch 'main' into Feature/Update-db-from-csv-dataBonfaceKilz
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