aboutsummaryrefslogtreecommitdiff
path: root/gn3/db
AgeCommit message (Expand)Author
2022-03-12db: Extend csv query to fetch case attributesBonfaceKilz
2022-03-12Revert "db: Fetch correct sample data"BonfaceKilz
2022-03-11Fix typing errorsFrederick Muriuki Muriithi
2022-02-21Fix minor issues introduced while fixing linting errorsFrederick Muriuki Muriithi
2022-02-21Fix a myriad of linter issuesFrederick Muriuki Muriithi
2022-02-21Test partial corrs API with mix of existing and non-existing control traitsFrederick Muriuki Muriithi
2022-02-19Test partial corrs endpoint with non-existing control traitsFrederick Muriuki Muriithi
2022-02-18Remove code trying to query non-existent `TempFreeze` tableFrederick Muriuki Muriithi
2022-02-18Test partial correlations endpoint with non-existent primary traitsFrederick Muriuki Muriithi
2022-02-08db: traits: Enable deletion of individual sample valuesBonfaceKilz
2022-02-08db: traits: Allow insertions of "0" in resp. sample values tablesBonfaceKilz
2022-02-08db: traits: Insert "count" instead of "error" in "NStrain" tableBonfaceKilz
2022-02-03db: Fetch correct sample dataBonfaceKilz
2022-02-02Remove PublishFreeze from retrieve_publish_trait_info queryzsloan
2022-02-02Fix bug where sample values of 0 were being treated as Falsezsloan
2022-02-02Fix retrieve_publish_trait_data queryzsloan
2022-01-12Indent code correctlyFrederick Muriuki Muriithi
2022-01-12Deduplicate query to fetch data for 'Publish' traitsFrederick Muriuki Muriithi
2022-01-10Check for path existenceFrederick Muriuki Muriithi
2022-01-10Fix dataset retrieval query for `Geno` traitsFrederick Muriuki Muriithi
2022-01-10Surround statement with parens for readabilityFrederick Muriuki Muriithi
2022-01-10Convert keys to stringFrederick Muriuki Muriithi
2022-01-10Fix error in query: Replace '=' with 'IN'Frederick Muriuki Muriithi
2022-01-10Rework database functions to fetch multiple itemsFrederick Muriuki Muriithi
2022-01-05Merge branch 'main' into fix/check-for-duplicates-before-deletions-or-insertionsBonfaceKilz
2022-01-04traits.py: Don't use "value" to check if a record existsBonfaceKilz
2022-01-04traits.py: Return early during an insert if the give record existsBonfaceKilz
2022-01-04traits.py Delete a record only if it existsBonfaceKilz
2021-12-23db: Assist mypy with explicit type declaration.Arun Isaac
2021-12-23db: Fix sparql_query return type.Arun Isaac
2021-12-23db: Fix wrong continued indentation.Arun Isaac
2021-12-14linting: Fix obvious linting issuesFrederick Muriuki Muriithi
2021-12-14Fix bug: expects int, gets object - Fixed.Frederick Muriuki Muriithi
2021-12-14mypy: ignore some imports and errorsFrederick Muriuki Muriithi
2021-12-14Set explicit formatting for sequences in queriesFrederick Muriuki Muriithi
2021-12-13Fix errors with queryFrederick Muriuki Muriithi
2021-12-10Fix parametersFrederick Muriuki Muriithi
2021-12-09Prevent error on no result. Fix indexingFrederick Muriuki Muriithi
2021-12-09Provide clearer error messageFrederick Muriuki Muriithi
2021-12-06Merge branch 'main' of github.com:genenetwork/genenetwork3Frederick Muriuki Muriithi
2021-12-02Implement dataset metadata API endpoint.Arun Isaac
2021-11-29Merge branch 'main' into partial-correlationsMuriithi Frederick Muriuki
2021-11-29Fix linting errorsFrederick Muriuki Muriithi
2021-11-29Provide entry-point function for the partial correlationsFrederick Muriuki Muriithi
2021-11-29Fix bugs in dataFrederick Muriuki Muriithi
2021-11-29Update return typeFrederick Muriuki Muriithi
2021-11-29Return only valuesFrederick Muriuki Muriithi
2021-11-29Update typing notations on functionsFrederick Muriuki Muriithi
2021-11-29Fix query parametrisationFrederick Muriuki Muriithi
2021-11-29Retrieve the species name given the groupFrederick Muriuki Muriithi