aboutsummaryrefslogtreecommitdiff
path: root/gn3/db
AgeCommit message (Expand)Author
2021-12-14Fix bug: expects int, gets object - Fixed.Frederick Muriuki Muriithi
2021-12-14mypy: ignore some imports and errorsFrederick Muriuki Muriithi
2021-12-14Set explicit formatting for sequences in queriesFrederick Muriuki Muriithi
2021-12-13Fix errors with queryFrederick Muriuki Muriithi
2021-12-10Fix parametersFrederick Muriuki Muriithi
2021-12-09Prevent error on no result. Fix indexingFrederick Muriuki Muriithi
2021-12-09Provide clearer error messageFrederick Muriuki Muriithi
2021-12-06Merge branch 'main' of github.com:genenetwork/genenetwork3Frederick Muriuki Muriithi
2021-12-02Implement dataset metadata API endpoint.Arun Isaac
2021-11-29Merge branch 'main' into partial-correlationsMuriithi Frederick Muriuki
2021-11-29Fix linting errorsFrederick Muriuki Muriithi
2021-11-29Provide entry-point function for the partial correlationsFrederick Muriuki Muriithi
2021-11-29Fix bugs in dataFrederick Muriuki Muriithi
2021-11-29Update return typeFrederick Muriuki Muriithi
2021-11-29Return only valuesFrederick Muriuki Muriithi
2021-11-29Update typing notations on functionsFrederick Muriuki Muriithi
2021-11-29Fix query parametrisationFrederick Muriuki Muriithi
2021-11-29Retrieve the species name given the groupFrederick Muriuki Muriithi
2021-11-29db: traits: Support additions and deletions from csv fileBonfaceKilz
2021-11-29db: traits: Remove trailing ".0" in int valuesBonfaceKilz
2021-11-29db: traits: Remove "\n\n" when generating csv fileBonfaceKilz
2021-11-25db: traits: Support additions and deletions from csv fileBonfaceKilz
2021-11-24db: traits: Remove trailing ".0" in int valuesBonfaceKilz
2021-11-23db: traits: Remove "\n\n" when generating csv fileBonfaceKilz
2021-11-23Fix a myriad of linting errorsFrederick Muriuki Muriithi
2021-11-23Update documentation for functionsFrederick Muriuki Muriithi
2021-11-22Add test to query buildersFrederick Muriuki Muriithi
2021-11-22Migrate `web.webqtl.correlation.CorrelationPage.fetchAllDatabaseData` functionFrederick Muriuki Muriithi
2021-11-22Make the DB connection argument the firstFrederick Muriuki Muriithi
2021-11-04Add some condition checking functionsFrederick Muriuki Muriithi
2021-11-04Fix linting and typing errorsFrederick Muriuki Muriithi
2021-11-04Rework sorting: remove `compare_tissue_correlation_absolute_values`Frederick Muriuki Muriithi
2021-11-04Complete `build_temporary_tissue_correlations_table`Frederick Muriuki Muriithi
2021-11-04Move `correlations_of_all_tissue_traits`Frederick Muriuki Muriithi
2021-11-04Add missing commaFrederick Muriuki Muriithi
2021-11-04Move the function to computations moduleFrederick Muriuki Muriithi
2021-11-04Remove if clauses: replace with dictFrederick Muriuki Muriithi
2021-11-04Stub out `batch_computed_tissue_correlation` functionFrederick Muriuki Muriithi
2021-11-04Complete `correlations_of_all_tissue_traits`Frederick Muriuki Muriithi
2021-11-04Implement `fetch_gene_symbol_tissue_value_dict_for_trait`Frederick Muriuki Muriithi
2021-10-25Start implementation of `fetch_tissue_correlations` and dependenciesFrederick Muriuki Muriithi
2021-10-25Implement `fetch_literature_correlations` and depedenciesFrederick Muriuki Muriithi
2021-10-25Implement `get_filename` for correlationsFrederick Muriuki Muriithi
2021-10-21Implement `translate_to_mouse_gene_id` functionFrederick Muriuki Muriithi
2021-10-18Move `export_informative` function to `gn3.db.traits` moduleFrederick Muriuki Muriithi
2021-10-18Move 'export_trait_data' to 'gn3.db.traits' moduleFrederick Muriuki Muriithi
2021-09-27Update terminology: `riset` to `group`Frederick Muriuki Muriithi
2021-09-27Update terminology: `strain` to `sample`Frederick Muriuki Muriithi
2021-09-22Fix more pylint errorsFrederick Muriuki Muriithi
2021-09-22Fix typing issuesFrederick Muriuki Muriithi