genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2022-03-12	Check whether publish data already exists before inserting...* gn3/db/sample_data.py (insert_sample_data): If data already exists in the table, do not attempt an insert; otherwise, an error will be generated.	BonfaceKilz
2022-03-12	Fetch id's separately for the insertion edge-case...* gn3/db/sample_data (get_sample_data_ids): Add an extra condition that caters for inserts: during inserts, joins won't work when fetching the strain_id, publishdata_id, and strain_name. In this case, just create 2 separate queries to do that work.	BonfaceKilz
2022-03-12	Extract a strain name given a csv string and it's header...* gn3/csvcmp.py (extract_strain_name): New function. * gn3/db/sample_data (delete_sample_data): Use the aforementioned function. (insert_sample_data): Ditto. * tests/unit/test_csvcmp: Test cases for above.	BonfaceKilz
2022-03-12	Allow deleting case-attribute data during deletion...* gn3/db/sample_data.py (delete_sample_data): Modify this function to allow deleting case-attribute values.	BonfaceKilz
2022-03-12	Allow inserting case-attribute data during inserts...* gn3/db/sample_data.py (insert_sample_data): Modify this function to allow inserting case-attribute values.	BonfaceKilz
2022-03-12	Fetch InbredSetId...* gn3/db/sample_data.py (get_sample_data_ids): Extend to also fetch InbredSetId. (update_sample_data): Discard the returned value of InbredSetId. (delete_sample_data): Ditto.	BonfaceKilz
2022-03-12	Create a new function for retrieving strain_id and publishdata_id...* gn3/db/sample_data.py: Import Any, Tuple. (get_sample_data_ids): New function that fetches the strain_id and publishdata_id of a given data point. (update_sample_data): Use `get_sample_data_ids`. (delete_sample_data): Ditto. (insert_sample_data): Ditto.	BonfaceKilz
2022-03-12	Move operations on sample_data to it's own module	BonfaceKilz